Factsheet for TraesCS6B01G321200.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, peroxisome

Predictor Summary:

plastid 1
vacuole 2
extracellular 1
endoplasmic reticulum 2
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, vacuole
Any Predictor:	peroxisome, plastid, secretory
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G291200.1	Wheat	vacuole	97.3	98.36
TraesCS6D01G272600.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	97.84	98.02
HORVU6Hr1G072910.3	Barley	cytosol, endoplasmic reticulum, peroxisome	95.68	96.2
EES05585	Sorghum	endoplasmic reticulum, peroxisome, plastid, vacuole	81.12	80.97
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	82.37	79.93
Zm00001d051761_P001	Maize	endoplasmic reticulum, peroxisome, vacuole	78.96	75.69
GSMUA_Achr6P30620_001	Banana	cytosol, nucleus, vacuole	57.19	58.35
TraesCS7B01G115900.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	51.8	56.69
VIT_17s0000g03880.t01	Wine grape	extracellular, plasma membrane, vacuole	43.7	51.37
PGSC0003DMT400010418	Potato	cytosol, nucleus, vacuole	45.86	45.7
Solyc06g069190.2.1	Tomato	cytosol, nucleus, vacuole	45.86	45.37
Bra032272.1-P	Field mustard	cytosol	42.63	43.97
CDY60079	Canola	cytosol	42.63	43.97
KRH39216	Soybean	nucleus, peroxisome, vacuole	44.06	42.83
CDY04326	Canola	cytosol, endoplasmic reticulum, vacuole	43.35	42.81
KRH48461	Soybean	nucleus, peroxisome, vacuole	43.7	42.33
AT1G49050.1	Thale cress	cytosol, plastid, vacuole	44.24	42.2
TraesCS4B01G098000.1	Wheat	plasma membrane, vacuole	27.52	37.14
TraesCS7B01G475600.1	Wheat	vacuole	27.88	36.9
TraesCS5B01G119900.1	Wheat	plasma membrane, vacuole	29.86	36.81
TraesCS4B01G103200.1	Wheat	golgi, plasma membrane	25.9	35.56
TraesCS4B01G098100.1	Wheat	plasma membrane, vacuole	23.2	32.66
TraesCS4B01G103400.1	Wheat	golgi, plasma membrane	24.82	32.47
TraesCS4B01G372300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	21.22	30.65
TraesCS5B01G038800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	22.12	30.0
TraesCS6B01G122100.1	Wheat	plasma membrane	22.12	30.0
TraesCS7B01G382700.1	Wheat	vacuole	19.96	23.57
TraesCS7B01G297200.2	Wheat	plasma membrane, vacuole	20.14	22.58
TraesCS2B01G291900.1	Wheat	extracellular, plasma membrane, vacuole	19.78	22.54
TraesCS3B01G346500.2	Wheat	plasma membrane	19.6	21.46
TraesCS2B01G079700.1	Wheat	vacuole	18.88	20.43
TraesCS6B01G332100.2	Wheat	plasma membrane	18.35	19.81
TraesCS3B01G145600.1	Wheat	cytosol, peroxisome, plastid, vacuole	15.47	19.46
TraesCS5B01G334700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	17.99	19.38
TraesCS3B01G145900.1	Wheat	plastid	15.29	19.23
TraesCS2B01G210700.2	Wheat	plasma membrane	17.63	15.51

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR021109	InterPro:IPR033121	InterPro:Nucellin	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543
PRINTS:PR00792	ScanProsite:PS00141	PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF334	InterPro:Peptidase_aspartic_dom_sf
SUPFAM:SSF50630	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G321200	EnsemblPlants:TraesCS6B01G321200.1
TIGR:cd05475	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:569034196..569038120

Molecular Weight (calculated)

60928.4 Da

IEP (calculated)

6.725

GRAVY (calculated)

-0.371

Length

556 amino acids

Sequence
(BLAST)

001: MPPPPPPPPP PEPPQLHGVV IITLPPPDQS SKGKTITAFT YTDEPGAGAP APPPHRGPPM AAAGREARRS RRAVSRRAGA MVLVLGALAL AAYYSFYSDV
101: AVQFLGMEEE EAQKERNETK SFLFQLYPKA PKAHQGRALR EFGDIKLAAK RVDDGGGRKI TKKLDVKGAT SAGTNSTVLL PIKGNVFPDG QYYTSIFVGN
201: PPRPYFLDVD TGSDLTWIQC DAPCTNCAQG PHPLYKPAKE KIVPPRDLLC QELQGDQNYC ETCKQCDYEI EYADRSSSMG VLAKDDMHLI ATNGGREKLD
301: FVFGCAYDQQ GQLLSSPAKT DGILGLSSAA ISLPSQLASK GIISNIFGHC ITRETNGGGY MFLGDDYVPR WGMTWAPIRG GPDNLYHTEA QKVNYGDQEL
401: SMHGHAGNSV QVIFDSGSSY TYLPEEMYKN LIDAIKDDSP SFVQDSSDTT LPLCWKADFS VRSFFKPLNL HFGRRWFVVP KTFTIVPDDY LIISEKGNVC
501: LGLLNGTEIN HGSTIIVGDV SLRGKLVVYD NERRQIGWAN SECTKPQSQK GFPFFL

Best Arabidopsis Sequence Match ( AT1G49050.1 )
(BLAST)

001: MEPDLHDQQQ QQRVHSVVII TLPPSDDPSQ GKTISAFTLT DHDYPLEIPP EDNPNPSFQP DPLHRNQQSR LLFSDLSMNS PRLVLGLLGI SLLAVAFYAS
101: VFPNSVQMFR VSPDERNRDD DDNLRETASF VFPVYHKLRA REFHERILEE DLGLENENFV ESMDLELVNP VKVNDVLSTS AGSIDSSTTI FPVGGNVYPD
201: GLYYTRILVG KPEDGQYYHL DIDTGSELTW IQCDAPCTSC AKGANQLYKP RKDNLVRSSE AFCVEVQRNQ LTEHCENCHQ CDYEIEYADH SYSMGVLTKD
301: KFHLKLHNGS LAESDIVFGC GYDQQGLLLN TLLKTDGILG LSRAKISLPS QLASRGIISN VVGHCLASDL NGEGYIFMGS DLVPSHGMTW VPMLHDSRLD
401: AYQMQVTKMS YGQGMLSLDG ENGRVGKVLF DTGSSYTYFP NQAYSQLVTS LQEVSGLELT RDDSDETLPI CWRAKTNFPF SSLSDVKKFF RPITLQIGSK
501: WLIISRKLLI QPEDYLIISN KGNVCLGILD GSSVHDGSTI ILGDISMRGH LIVYDNVKRR IGWMKSDCVR PREIDHNVPF FQG

Arabidopsis Description

APCB1Aspartyl protease APCB1 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9A8]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.