Factsheet for Os04t0228000-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0471300-01
Os08t0497900-01
Os09t0481300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G17760.1	Os04t0471300-01	AT4G26455.1	21798944
AT2G17760.1	Os08t0497900-01	AT4G26455.1	21798944
AT2G17760.1	Os09t0481300-01	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25917	Sorghum	vacuole	79.62	81.62
TraesCS2D01G065800.1	Wheat	vacuole	78.11	81.18
TraesCS2B01G079700.1	Wheat	vacuole	78.68	81.13
Zm00001d004132_P001	Maize	extracellular	79.25	81.08
TraesCS2A01G067500.1	Wheat	vacuole	77.55	80.12
PGSC0003DMT400010765	Potato	cytosol	16.79	47.85
VIT_00s0510g00050.t01	Wine grape	plasma membrane, vacuole	26.98	46.73
Os09t0542100-01	Rice	plasma membrane	41.89	45.31
AT2G17760.1	Thale cress	golgi, plasma membrane, vacuole	43.58	45.03
Bra002086.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.26	44.53
KRH28845	Soybean	vacuole	42.64	44.49
CDY24371	Canola	extracellular, plasma membrane, vacuole	42.64	44.14
KRH76603	Soybean	vacuole	42.26	44.09
Bra024490.1-P	Field mustard	vacuole	42.26	43.84
CDY29199	Canola	vacuole	42.26	43.84
CDY07819	Canola	vacuole	41.89	43.44
KRH07991	Soybean	nucleus	42.08	43.22
Os06t0717900-02	Rice	extracellular	44.91	43.19
PGSC0003DMT400009406	Potato	plasma membrane, vacuole	43.4	42.67
Solyc02g083460.2.1	Tomato	extracellular	43.21	42.49
Solyc03g033360.1.1	Tomato	plastid	30.94	42.16
CDY02252	Canola	golgi, plasma membrane, vacuole	23.77	40.38
Bra036814.1-P	Field mustard	vacuole	36.79	40.37
CDX73727	Canola	vacuole	37.36	40.16
PGSC0003DMT400058018	Potato	vacuole	41.32	40.04
AT3G51360.9	Thale cress	vacuole	37.55	39.96
Bra013063.1-P	Field mustard	plasma membrane	21.7	39.66
AT3G51330.1	Thale cress	extracellular, plasma membrane, vacuole	39.25	39.32
CDX78000	Canola	vacuole	36.79	38.69
CDX90651	Canola	plasma membrane	38.87	38.58
AT3G51350.1	Thale cress	extracellular, plasma membrane, vacuole	37.74	37.88
CDY29013	Canola	plasma membrane	38.11	37.83
Bra012857.1-P	Field mustard	plasma membrane	31.89	37.47
CDY20815	Canola	plasma membrane, plastid, vacuole	42.45	37.31
KRH69733	Soybean	nucleus	41.89	36.88
CDX73728	Canola	vacuole	36.6	36.06
AT3G51340.1	Thale cress	plasma membrane	35.85	35.85
CDX77999	Canola	vacuole	36.23	35.82
Os02t0751100-01	Rice	plasma membrane	35.09	35.77
Bra036815.1-P	Field mustard	vacuole	36.42	35.61
Os04t0337000-01	Rice	mitochondrion	15.47	25.55
Os11t0184800-01	Rice	vacuole	19.06	24.63
Os12t0177500-01	Rice	plasma membrane, vacuole	19.43	24.47
Os11t0184600-00	Rice	extracellular	10.38	23.4
Os02t0473200-01	Rice	plasma membrane	21.51	23.08
Os11t0183900-01	Rice	plasma membrane	17.92	22.73
Os04t0334951-01	Rice	extracellular	18.11	22.17
Os04t0336600-00	Rice	extracellular	18.87	20.75
Os04t0334700-01	Rice	extracellular	18.87	20.75
Os06t0268700-01	Rice	vacuole	18.49	18.22
Os02t0730700-02	Rice	cytosol, peroxisome, vacuole	18.87	17.45
Os07t0592200-02	Rice	plasma membrane	19.81	16.64

Protein Annotations

MapMan:19.4.3.1	Gene3D:2.40.70.10	EntrezGene:4335219	EMBL:AK105031	InterPro:Aspartic_peptidase_A1	InterPro:Aspartic_peptidase_AS
ProteinID:BAF14201.1	ProteinID:BAS88217.1	ProteinID:CAE01958.2	ProteinID:EEE60357.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004190	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0016787	GO:GO:0019538	GO:GO:0030163	InterPro:IPR021109	InterPro:IPR033121	EnsemblPlantsGene:Os04g0228000
EnsemblPlants:Os04t0228000-01	InterPro:PEPTIDASE_A1	PFAM:PF14541	PFAM:PF14543	PRINTS:PR00792	ScanProsite:PS00141
PFscan:PS51767	PANTHER:PTHR13683	PANTHER:PTHR13683:SF556	InterPro:Pepsin-like_dom	InterPro:Peptidase_aspartic_dom_sf	UniProt:Q7X5X8
SUPFAM:SSF50630	SignalP:SignalP-noTM	InterPro:TAXi_C	InterPro:TAXi_N	TMHMM:TMhelix	UniParc:UPI000021C7E0
RefSeq:XP_015636453.1	SEG:seg	:	:	:	:

Description

Peptidase A1 domain containing protein. (Os04t0228000-01)

Coordinates

chr4:+:8578980..8585626

Molecular Weight (calculated)

56892.1 Da

IEP (calculated)

5.229

GRAVY (calculated)

-0.045

Length

530 amino acids

Sequence
(BLAST)

001: MSSFQLLLHS LLLLLVVGGV AGGGGGGGRL RAPSLEFHHR FSSPVQRWAE ARGHVLPGGW PEHGSADYVA ALNGHDRRRA LSAAGGDGGG GGDKPPPLTF
101: SEGNATLKVS NLGFLHYALV TVGTPGQTFM VALDTGSDLF WLPCQCDGCT PPASAASGSA SFYIPSMSST SQAVPCNSQF CELRKECSTT SQCPYKMVYV
201: SADTSSSGFL VEDVLYLSTE DAIPQILKAQ ILFGCGQVQT GSFLDAAAPN GLFGLGIDMI SIPSILAQKG LTSNSFAMCF SRDGIGRISF GDQGSSDQEE
301: TPLDVNPQHP TYTISISEIT VGNSLTDLEF STIFDTGTSF TYLADPAYTY ITQSFHAQVH ANRHAADSRI PFEYCYDLSS SEDRIQTPSI SLRTVGGSVF
401: PVIDEGQVIS IQQHEYVYCL AIVKSAKLNI IGQNFMTGLR VVFDRERKIL GWKKFNCYDT DSSNPLSINS RNSSGFSPSA PENYSPEETK GGNPASVTQL
501: RPLSNSNPVM WYDSLVFRFL LVNLAALILF

Best Arabidopsis Sequence Match ( AT4G35880.1 )
(BLAST)

001: MSCCFFKTTL FLIPILMLLS FGSCNGRIFT FEMHHRFSDE VKQWSDSTGR FAKFPPKGSF EYFNALVLRD WLIRGRRLSE SESESESSLT FSDGNSTSRI
101: SSLGFLHYTT VKLGTPGMRF MVALDTGSDL FWVPCDCGKC APTEGATYAS EFELSIYNPK VSTTNKKVTC NNSLCAQRNQ CLGTFSTCPY MVSYVSAQTS
201: TSGILMEDVM HLTTEDKNPE RVEAYVTFGC GQVQSGSFLD IAAPNGLFGL GMEKISVPSV LAREGLVADS FSMCFGHDGV GRISFGDKGS SDQEETPFNL
301: NPSHPNYNIT VTRVRVGTTL IDDEFTALFD TGTSFTYLVD PMYTTVSESF HSQAQDKRHS PDSRIPFEYC YDMSNDANAS LIPSLSLTMK GNSHFTINDP
401: IIVISTEGEL VYCLAIVKSS ELNIIGQNYM TGYRVVFDRE KLVLAWKKFD CYDIEETNTT VAGTNKTAAV APAMAAGIKT HNNSSELHKT NQTISKSNSS
501: PNQISKTVDV WSFFRFVFIL LPLV

Arabidopsis Description

AT4G35880 protein [Source:UniProtKB/TrEMBL;Acc:B3LF45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.