Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G10730.1 | KRH10001 | AT3G13720.1 | 21798944 |
| AT5G10730.1 | KRH23330 | AT3G13720.1 | 21798944 |
| AT5G10730.1 | KRH44167 | AT3G13720.1 | 21798944 |
| AT5G10730.1 | KRH47141 | AT3G13720.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88571 | Soybean | extracellular | 39.62 | 76.36 |
| Zm00001d040954_P001 | Maize | cytosol | 61.32 | 58.04 |
| KRH52293 | Soybean | cytosol | 63.21 | 50.76 |
| KRG88574 | Soybean | cytosol | 29.25 | 38.27 |
| KRH61625 | Soybean | mitochondrion | 93.4 | 34.49 |
| AT5G10730.1 | Thale cress | mitochondrion | 83.02 | 30.66 |
| Bra009010.1-P | Field mustard | mitochondrion | 82.08 | 30.21 |
| CDX69807 | Canola | mitochondrion | 82.08 | 30.21 |
| CDX97050 | Canola | mitochondrion | 82.08 | 30.21 |
| Solyc08g006510.2.1 | Tomato | plastid, unclear | 80.19 | 30.14 |
| Bra028572.1-P | Field mustard | mitochondrion | 82.08 | 30.1 |
| CDY40113 | Canola | mitochondrion | 82.08 | 30.1 |
| CDY67689 | Canola | mitochondrion | 82.08 | 30.0 |
| GSMUA_Achr1P19070_001 | Banana | plastid | 79.25 | 29.47 |
| VIT_04s0008g07400.t01 | Wine grape | cytosol | 81.13 | 29.05 |
| KRH52291 | Soybean | mitochondrion | 66.98 | 27.52 |
| Os02t0556100-01 | Rice | mitochondrion | 70.75 | 25.68 |
| HORVU5Hr1G073450.4 | Barley | mitochondrion | 69.81 | 25.17 |
| TraesCS5A01G165800.1 | Wheat | golgi | 69.81 | 25.17 |
| TraesCS5B01G162400.1 | Wheat | mitochondrion | 68.87 | 24.83 |
| KRG88572 | Soybean | cytosol, extracellular | 25.47 | 22.69 |
| EES00762 | Sorghum | mitochondrion, plastid | 66.98 | 17.44 |
| KRH74352 | Soybean | plastid | 37.74 | 13.2 |
| KRH39581 | Soybean | mitochondrion, plastid | 35.85 | 12.54 |
| KRG88575 | Soybean | mitochondrion | 1.89 | 2.17 |
| Zm00001d040953_P001 | Maize | mitochondrion, plastid | 2.83 | 1.57 |
Protein Annotations
| EnsemblPlants:KRG88578 | EnsemblPlantsGene:GLYMA_U003400 | EntrezGene:106797924 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR12126 |
| PANTHER:PTHR12126:SF8 | ProteinID:KRG88577.1 | ProteinID:KRG88578 | ProteinID:KRG88578.1 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI0006EDB6DE | UniProt:A0A0R0EB51 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_123:-:62814..64707
Molecular Weight (calculated)
11333.1 Da
IEP (calculated)
10.630
GRAVY (calculated)
0.273
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRAAETELL TRFPFGGVIL RPGFIYGTRS FGSMKIPLGV VGSPLEMVLQ VAKPLNQIPL VGPLLTPPVN VTAVAKVAVR AATDPVFPPG IIDAYGIQRY
101: SQNKSN
101: SQNKSN
001: MRTIVSRLIR YQSSLSQIRF VSASGGGRYL STDSNKIDEP FNVEEAETVH VPPPPTEKLL VLGGNGFVGS HVCKEALDRG LSVSSLSRSG RSSLQESWAS
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR
Arabidopsis Description
AT5g10730/MAJ23_90 [Source:UniProtKB/TrEMBL;Acc:Q93VH5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.