Factsheet for HORVU5Hr1G073450.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G028520.1
HORVU3Hr1G018940.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10730.1	HORVU1Hr1G028520.1	AT3G13720.1	21798944
AT5G10730.1	HORVU3Hr1G018940.2	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G165800.1	Wheat	golgi	96.94	96.94
TraesCS5B01G162400.1	Wheat	mitochondrion	96.26	96.26
Os02t0556100-01	Rice	mitochondrion	81.29	81.85
Zm00001d040954_P001	Maize	cytosol	30.61	80.36
GSMUA_Achr1P19070_001	Banana	plastid	71.09	73.33
KRG88574	Soybean	cytosol	20.07	72.84
KRG88578	Soybean	cytosol	25.17	69.81
Bra028572.1-P	Field mustard	mitochondrion	68.03	69.2
AT5G10730.1	Thale cress	mitochondrion	67.01	68.64
Bra009010.1-P	Field mustard	mitochondrion	65.99	67.36
KRH52293	Soybean	cytosol	29.93	66.67
KRH61625	Soybean	mitochondrion	63.95	65.51
Solyc08g006510.2.1	Tomato	plastid, unclear	60.54	63.12
KRG88571	Soybean	extracellular	11.56	61.82
VIT_04s0008g07400.t01	Wine grape	cytosol	61.22	60.81
KRG88572	Soybean	cytosol, extracellular	24.49	60.5
EES00762	Sorghum	mitochondrion, plastid	80.27	57.99
KRH52291	Soybean	mitochondrion	46.26	52.71
KRG88575	Soybean	mitochondrion	14.97	47.83
CDX97051	Canola	cytosol, extracellular, plastid	14.63	40.57
HORVU2Hr1G071860.2	Barley	plastid	36.05	28.8

Protein Annotations

EnsemblPlants:HORVU5Hr1G073450.4	EnsemblPlantsGene:HORVU5Hr1G073450	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR12126	PANTHER:PTHR12126:SF8
PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000224A817	UniProt:A0A287RSF2	MapMan:35.1

Description

No Description!

Coordinates

chrchr5H:-:539171773..539182324

Molecular Weight (calculated)

31214.8 Da

IEP (calculated)

9.972

GRAVY (calculated)

-0.003

Length

294 amino acids

Sequence
(BLAST)

001: MRSALSHLIR SSSSASPSRL SSPVLLKNGK AFSSDATPRD SRLVDEPFKV EEAEPVKVPP PPPSPDKLLV LGGSGFVGSH VCKEALERGF VVSSLNRSGK
101: PSISESWADK VIWNQGNLLE PASLEDSMDG VSAVVSCVGG FGSNSQMFKL NGTANINAIR AAAEKGIKRF VYVSAADFGL VNYLLQGYYE GKRAAEAELL
201: SKFTYGGVIL RPGFIHGTRR VGSMNIPLGL VGSPMQMVLQ NAKPLTRLPL VGPMLTPPVS AASVAKVAVR AATDPVFPPG IVDVYGIMRY SEQK

Best Arabidopsis Sequence Match ( AT5G10730.1 )
(BLAST)

001: MRTIVSRLIR YQSSLSQIRF VSASGGGRYL STDSNKIDEP FNVEEAETVH VPPPPTEKLL VLGGNGFVGS HVCKEALDRG LSVSSLSRSG RSSLQESWAS
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR

Arabidopsis Description

AT5g10730/MAJ23_90 [Source:UniProtKB/TrEMBL;Acc:Q93VH5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.