Factsheet for Bra028572.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40113	Canola	mitochondrion	98.96	98.96
CDY67689	Canola	mitochondrion	98.62	98.28
Bra009010.1-P	Field mustard	mitochondrion	90.66	90.97
KRG88578	Soybean	cytosol	30.1	82.08
KRH61625	Soybean	mitochondrion	77.85	78.4
Solyc08g006510.2.1	Tomato	plastid, unclear	75.78	77.66
GSMUA_Achr1P19070_001	Banana	plastid	75.43	76.49
KRG88574	Soybean	cytosol	20.76	74.07
VIT_04s0008g07400.t01	Wine grape	cytosol	74.74	72.97
KRH52293	Soybean	cytosol	31.49	68.94
HORVU5Hr1G073450.4	Barley	mitochondrion	69.2	68.03
TraesCS5A01G165800.1	Wheat	golgi	68.51	67.35
Os02t0556100-01	Rice	mitochondrion	67.82	67.12
TraesCS5B01G162400.1	Wheat	mitochondrion	68.17	67.01
KRG88571	Soybean	extracellular	12.46	65.45
Zm00001d040954_P001	Maize	cytosol	25.26	65.18
KRG88572	Soybean	cytosol, extracellular	26.3	63.87
Zm00001d040953_P001	Maize	mitochondrion, plastid	40.48	61.26
Bra023545.1-P	Field mustard	mitochondrion, plastid	52.94	56.46
KRH52291	Soybean	mitochondrion	49.48	55.43
KRG88575	Soybean	mitochondrion	17.3	54.35
EES00762	Sorghum	mitochondrion, plastid	67.13	47.67
Bra023250.1-P	Field mustard	plastid	34.26	34.02

Protein Annotations

EnsemblPlants:Bra028572.1	EnsemblPlants:Bra028572.1-P	EnsemblPlantsGene:Bra028572	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR12126	PANTHER:PTHR12126:SF8	PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00025434DC
UniProt:M4EIF7	MapMan:35.1	:	:	:	:

Description

AT5G10730 (E=2e-139) | binding / catalytic/ coenzyme binding

Coordinates

chrA02:+:1110479..1112299

Molecular Weight (calculated)

31078.2 Da

IEP (calculated)

9.820

GRAVY (calculated)

-0.079

Length

289 amino acids

Sequence
(BLAST)

001: MRTIVSRLIR FKSSFAQTRF VSASYGGGGR YLSTDSNKID EPFDAEEAET VHVPPPPTEK LLVLGGNGFV GSHVCKEALD RGLSVSSLSR SGKSSLQESW
101: ASRVTWHQGN LLSSDSLKDA LDGVTSVISC VGGFGSNSYM YKINGTANIN AIRAASEKGV KRFVYISAAD FGLANYLLSG YYEGKRAAET ELLTRFAYGG
201: IVLRPGFIYG TRSVGSMKIP LGVFGSPMEM VLQQAKPLNQ LPLVGPLFTP PVNVESVAKV AVRAATDPVF PPGIVDVHGI QRYSQQKSR

Best Arabidopsis Sequence Match ( AT5G10730.1 )
(BLAST)

001: MRTIVSRLIR YQSSLSQIRF VSASGGGRYL STDSNKIDEP FNVEEAETVH VPPPPTEKLL VLGGNGFVGS HVCKEALDRG LSVSSLSRSG RSSLQESWAS
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR

Arabidopsis Description

AT5g10730/MAJ23_90 [Source:UniProtKB/TrEMBL;Acc:Q93VH5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.