CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67689	Canola	mitochondrion	99.65	99.31
Bra028572.1-P	Field mustard	mitochondrion	98.96	98.96
CDX97050	Canola	mitochondrion	92.39	92.71
CDX69807	Canola	mitochondrion	91.7	92.01
KRG88578	Soybean	cytosol	30.1	82.08
KRH61625	Soybean	mitochondrion	78.55	79.09
Solyc08g006510.2.1	Tomato	plastid, unclear	76.47	78.37
KRG88574	Soybean	cytosol	20.76	74.07
VIT_04s0008g07400.t01	Wine grape	cytosol	75.09	73.31
KRH52293	Soybean	cytosol	31.49	68.94
KRG88571	Soybean	extracellular	12.46	65.45
KRG88572	Soybean	cytosol, extracellular	26.3	63.87
CDX90965	Canola	mitochondrion	54.33	57.93
CDX85525	Canola	mitochondrion, plastid	54.33	57.93
KRG88575	Soybean	mitochondrion	17.99	56.52
KRH52291	Soybean	mitochondrion	50.17	56.2
CDX97051	Canola	cytosol, extracellular, plastid	17.99	49.06
CDY64420	Canola	plastid	34.6	34.48
CDY12254	Canola	plastid	34.6	34.36

Protein Annotations

EnsemblPlants:CDY40113	EnsemblPlantsGene:GSBRNA2T00069037001	Gene3D:3.40.50.720	GO:A0A078HTN9	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR12126	PANTHER:PTHR12126:SF8	PFAM:PF13460	ProteinID:CDY40113	ProteinID:CDY40113.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0004EE810B	UniProt:A0A078HTN9	MapMan:35.1	:	:

Description

BnaC02g00170DBnaC02g00170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HTN9]

Coordinates

chrLK032463:-:260122..262385

Molecular Weight (calculated)

31135.3 Da

IEP (calculated)

9.927

GRAVY (calculated)

-0.072

Length

289 amino acids

Sequence
(BLAST)

001: MRTIVSRLIR FKSSFAQTRF VSASYSGGGR YLSTDSNKID EPFNVEEAET VHVPPPPTEK LLVLGGNGFV GSHVCKEALD RGLSVSSLSR SGKSSLQESW
101: ASRVTWHQGN LLSSDSLKDA LDGVTSVISC VGGFGSNSYM YKINGTANIN AIRAASEKGV KRFVYISAAD FGLANYLLSG YYEGKRAAET ELLTRFAYGG
201: IVLRPGFIYG TRSVGSMKIP LGVFGSPMEM VLQQAKPLNQ LPLVGPLFTP PVNVESVAKV AVRAATDPVF PPGIVDVHGI QRYSQQKSR

Best Arabidopsis Sequence Match ( AT5G10730.1 )
(BLAST)

001: MRTIVSRLIR YQSSLSQIRF VSASGGGRYL STDSNKIDEP FNVEEAETVH VPPPPTEKLL VLGGNGFVGS HVCKEALDRG LSVSSLSRSG RSSLQESWAS
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR

Arabidopsis Description

AT5g10730/MAJ23_90 [Source:UniProtKB/TrEMBL;Acc:Q93VH5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.