CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023250.1-P	Field mustard	plastid	99.31	99.31
CDY64420	Canola	plastid	96.56	96.9
AT1G32220.1	Thale cress	plastid	89.0	87.5
VIT_02s0012g01900.t01	Wine grape	plastid	70.1	69.39
PGSC0003DMT400038370	Potato	cytosol	48.8	69.27
KRH74352	Soybean	plastid	70.45	67.66
KRH39581	Soybean	mitochondrion, plastid	69.42	66.67
Zm00001d000123_P003	Maize	plastid	68.04	64.71
GSMUA_Achr4P12290_001	Banana	plastid	70.45	64.67
EES10717	Sorghum	plastid	65.98	62.75
Solyc08g076450.2.1	Tomato	plastid	66.32	62.66
Os04t0403500-01	Rice	plastid	66.32	61.86
PGSC0003DMT400038371	Potato	plastid	64.95	61.16
TraesCS2A01G290300.1	Wheat	plastid	64.26	60.32
TraesCS2B01G306800.1	Wheat	plastid	62.89	59.03
TraesCS2D01G288200.1	Wheat	plastid	62.54	58.71
HORVU2Hr1G071860.2	Barley	plastid	62.89	49.73
CDX85525	Canola	mitochondrion, plastid	36.77	39.48
CDX90965	Canola	mitochondrion	35.74	38.38
CDY40113	Canola	mitochondrion	34.36	34.6
CDY67689	Canola	mitochondrion	34.36	34.48
CDX97050	Canola	mitochondrion	34.02	34.38
CDX69807	Canola	mitochondrion	34.02	34.38
CDX97051	Canola	cytosol, extracellular, plastid	9.97	27.36

Protein Annotations

EnsemblPlants:CDY12254	EnsemblPlantsGene:GSBRNA2T00061300001	Gene3D:3.40.50.720	GO:A0A078FGX0	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR12126	PANTHER:PTHR12126:SF5	PFAM:PF13460	ProteinID:CDY12254	ProteinID:CDY12254.1	SUPFAM:SSF51735
UniParc:UPI0004EDC3C1	UniProt:A0A078FGX0	MapMan:35.1	:	:	:

Description

BnaA09g24540DBnaA09g24540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGX0]

Coordinates

chrLK032019:-:38839..40618

Molecular Weight (calculated)

31476.9 Da

IEP (calculated)

6.543

GRAVY (calculated)

0.152

Length

291 amino acids

Sequence
(BLAST)

001: MSSFLSFPAI SPLPSASSGA SFRHRSLSPR LFKPCVKCSY AEAAPIDIVA DVRSERVVVL GGNGFVGSAI CKEAISKGIE VVSVSRSGRP SLQDSWLDQV
101: TWVTGDVFYL NWDEVLLGAT AVVSTIGGFG NEEQMKRING EANVIAVNAA KDFGVPKFVL ITVHDYNLPP FVLSSGYFTG KRSAEAELLS KYPNSGVVLR
201: PGFIYGKRKV NGFEVPLDLV GEPLDKIYDA AERFIRPLRS LPASDLILAP PVKVDDLALA VINALKDDDV FGIFTIEQIK EAASKMRALS Y

Best Arabidopsis Sequence Match ( AT1G32220.1 )
(BLAST)

001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA

Arabidopsis Description

Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.