Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G306800.1 | Wheat | plastid | 87.74 | 87.74 |
| TraesCS2A01G290300.1 | Wheat | plastid | 85.16 | 85.16 |
| Zm00001d000123_P003 | Maize | plastid | 82.26 | 83.33 |
| EES10717 | Sorghum | plastid | 81.61 | 82.68 |
| HORVU2Hr1G071860.2 | Barley | plastid | 97.74 | 82.34 |
| Os04t0403500-01 | Rice | plastid | 77.74 | 77.24 |
| PGSC0003DMT400038370 | Potato | cytosol | 47.74 | 72.2 |
| GSMUA_Achr4P12290_001 | Banana | plastid | 69.03 | 67.51 |
| KRH74352 | Soybean | plastid | 65.16 | 66.67 |
| VIT_02s0012g01900.t01 | Wine grape | plastid | 63.23 | 66.67 |
| KRH39581 | Soybean | mitochondrion, plastid | 65.16 | 66.67 |
| Solyc08g076450.2.1 | Tomato | plastid | 64.84 | 65.26 |
| PGSC0003DMT400038371 | Potato | plastid | 64.52 | 64.72 |
| AT1G32220.1 | Thale cress | plastid | 60.65 | 63.51 |
| Bra023250.1-P | Field mustard | plastid | 59.03 | 62.89 |
| CDY12254 | Canola | plastid | 58.71 | 62.54 |
| CDY64420 | Canola | plastid | 58.39 | 62.41 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G288200.1 | EnsemblPlantsGene:TraesCS2D01G288200 | Gene3D:3.40.50.720 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0010287 | InterPro:NAD(P)-bd_dom | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR12126 | PANTHER:PTHR12126:SF5 |
| PFAM:PF13460 | SEG:seg | SUPFAM:SSF51735 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr2D:+:369466447..369479684
Molecular Weight (calculated)
32954.4 Da
IEP (calculated)
6.543
GRAVY (calculated)
0.122
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHSTLLVRP PAPANPSLPP RQCAPVSAAA ATLRTSPAAS SVAQFSRLRT KCRFAAPGVR EDYSSTPIDV VADVKTEKIV VLGGSGFVGS AICRAAVAKG
101: IEVVSLSRSG RPSYSDPWAD EVTWLAGDVF YARWEDVLVG ATAVVSTLGG FGNEEQMKRI NGEANTIAVD AAKEFGIPKF ILISVHDYNL PSFLLTPGYF
201: TGKRKAESEV LSKYPSSGVV LRPGFIYGKR KVDGYEIPLD IVGQPLEKLL SSVENFTKPL SALPGSDLVL ASPVNVDDVA YAVINAVIDD SFFGVFTIEQ
301: IKEAAASARV
101: IEVVSLSRSG RPSYSDPWAD EVTWLAGDVF YARWEDVLVG ATAVVSTLGG FGNEEQMKRI NGEANTIAVD AAKEFGIPKF ILISVHDYNL PSFLLTPGYF
201: TGKRKAESEV LSKYPSSGVV LRPGFIYGKR KVDGYEIPLD IVGQPLEKLL SSVENFTKPL SALPGSDLVL ASPVNVDDVA YAVINAVIDD SFFGVFTIEQ
301: IKEAAASARV
001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA
Arabidopsis Description
Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.