Factsheet for Bra023250.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY12254	Canola	plastid	99.31	99.31
CDY64420	Canola	plastid	97.25	97.59
AT1G32220.1	Thale cress	plastid	89.35	87.84
PGSC0003DMT400038370	Potato	cytosol	49.14	69.76
VIT_02s0012g01900.t01	Wine grape	plastid	70.45	69.73
KRH74352	Soybean	plastid	70.45	67.66
KRH39581	Soybean	mitochondrion, plastid	69.42	66.67
GSMUA_Achr4P12290_001	Banana	plastid	70.79	64.98
Zm00001d000123_P003	Maize	plastid	67.7	64.38
EES10717	Sorghum	plastid	66.32	63.07
Solyc08g076450.2.1	Tomato	plastid	66.67	62.99
Os04t0403500-01	Rice	plastid	66.67	62.18
PGSC0003DMT400038371	Potato	plastid	65.29	61.49
TraesCS2A01G290300.1	Wheat	plastid	64.6	60.65
TraesCS2B01G306800.1	Wheat	plastid	63.23	59.35
TraesCS2D01G288200.1	Wheat	plastid	62.89	59.03
HORVU2Hr1G071860.2	Barley	plastid	63.23	50.0
Bra023545.1-P	Field mustard	mitochondrion, plastid	36.08	38.75
Bra009010.1-P	Field mustard	mitochondrion	34.02	34.38
Bra028572.1-P	Field mustard	mitochondrion	34.02	34.26

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EnsemblPlantsGene:Bra023250	EnsemblPlants:Bra023250.1	EnsemblPlants:Bra023250.1-P	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0010287	UniProt:M4E399	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR12126	PANTHER:PTHR12126:SF5	SUPFAM:SSF51735	UniParc:UPI00025422E6

Description

AT1G32220 (E=2e-129) | binding / catalytic/ coenzyme binding

Coordinates

chrA09:-:20237100..20238548

Molecular Weight (calculated)

31474.9 Da

IEP (calculated)

6.543

GRAVY (calculated)

0.162

Length

291 amino acids

Sequence
(BLAST)

001: MSSFLSFPAI SPLPSASSGA SFRHRSLSPR LFKPCVKCSY AEAAPIDIVA DVRSERVVVL GGNGFVGSAI CKEAISKGIE VVSVSRSGRP SLQDSWLDQV
101: TWVTGDVFYL NWDEVLLGAT AVVSTIGGFG NEEQMKRING EANVIAVNAA KDFGVPKFVL ITVHDYNLPP FVLSSGYFTG KRSAEAELLS KYPNSGVVLR
201: PGFIYGKRKV NGFEVPLDLV GEPLDKIYDA AERFIRPLRS LPASDLILAP PVKVDDLALA VINALKDDDI FGIFTIEQIK EAAAKMRALS Y

Best Arabidopsis Sequence Match ( AT1G32220.1 )
(BLAST)

001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA

Arabidopsis Description

Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.