Factsheet for Bra009010.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra021502.1-P
Bra021503.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10730.1	Bra021502.1-P	AT3G13720.1	21798944
AT5G10730.1	Bra021503.1-P	AT3G13720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69807	Canola	mitochondrion	100.0	100.0
AT5G10730.1	Thale cress	mitochondrion	92.36	92.68
Bra028572.1-P	Field mustard	mitochondrion	90.97	90.66
KRG88578	Soybean	cytosol	30.21	82.08
Solyc08g006510.2.1	Tomato	plastid, unclear	76.39	78.01
KRH61625	Soybean	mitochondrion	77.08	77.35
GSMUA_Achr1P19070_001	Banana	plastid	74.31	75.09
KRG88574	Soybean	cytosol	20.83	74.07
VIT_04s0008g07400.t01	Wine grape	cytosol	75.0	72.97
KRH52293	Soybean	cytosol	31.6	68.94
Os02t0556100-01	Rice	mitochondrion	67.36	66.44
Zm00001d040954_P001	Maize	cytosol	25.69	66.07
HORVU5Hr1G073450.4	Barley	mitochondrion	67.36	65.99
TraesCS5A01G165800.1	Wheat	golgi	67.01	65.65
KRG88571	Soybean	extracellular	12.5	65.45
TraesCS5B01G162400.1	Wheat	mitochondrion	66.32	64.97
KRG88572	Soybean	cytosol, extracellular	26.04	63.03
Zm00001d040953_P001	Maize	mitochondrion, plastid	40.62	61.26
Bra023545.1-P	Field mustard	mitochondrion, plastid	51.39	54.61
KRH52291	Soybean	mitochondrion	48.26	53.88
KRG88575	Soybean	mitochondrion	16.67	52.17
EES00762	Sorghum	mitochondrion, plastid	67.01	47.42
Bra023250.1-P	Field mustard	plastid	34.38	34.02

Protein Annotations

EnsemblPlants:Bra009010.1	EnsemblPlants:Bra009010.1-P	EnsemblPlantsGene:Bra009010	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR12126	PANTHER:PTHR12126:SF8
PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00025444E2	UniProt:M4CXR3	MapMan:35.1

Description

AT5G10730 (E=1e-136) | binding / catalytic/ coenzyme binding

Coordinates

chrA10:+:14859264..14860755

Molecular Weight (calculated)

31147.5 Da

IEP (calculated)

10.069

GRAVY (calculated)

-0.075

Length

288 amino acids

Sequence
(BLAST)

001: MRTIVTRLIR HKSSVPQTRF VSASSTGGRY LSTDSNKIDE PFNVEEAETV HVPPPLTEKL LVLGGNGFVG SHVCKEALDR GLSVSSLSRS GRSSLQEPWA
101: TRVTWHQGNL LSSDLLKDAL DGVTSVISCV GGFGSNSYMY KINGTANINA IRAASEKGVK RFVYISAADF GLAKYLLSGY YEGKRAAETE LLTRFAYGGI
201: ILRPGFIYGT RSVGNMKIPL GVFGSPMEMV LQQAKPLNQL PLVGPLFTPP VNVESVAKVA VRAATDPVFP PGIVDVHGIQ RYSQQKSR

Best Arabidopsis Sequence Match ( AT5G10730.1 )
(BLAST)

001: MRTIVSRLIR YQSSLSQIRF VSASGGGRYL STDSNKIDEP FNVEEAETVH VPPPPTEKLL VLGGNGFVGS HVCKEALDRG LSVSSLSRSG RSSLQESWAS
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR

Arabidopsis Description

AT5g10730/MAJ23_90 [Source:UniProtKB/TrEMBL;Acc:Q93VH5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.