Factsheet for Bra023545.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85525	Canola	mitochondrion, plastid	94.83	94.83
AT5G15910.1	Thale cress	mitochondrion	86.72	87.36
Bra028572.1-P	Field mustard	mitochondrion	56.46	52.94
Bra009010.1-P	Field mustard	mitochondrion	54.61	51.39
Bra023250.1-P	Field mustard	plastid	38.75	36.08

Protein Annotations

EnsemblPlants:Bra023545.1	EnsemblPlants:Bra023545.1-P	EnsemblPlantsGene:Bra023545	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	ncoils:Coil
PANTHER:PTHR12126	PANTHER:PTHR12126:SF8	PFAM:PF13460	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00025436C5
UniProt:M4E442	MapMan:35.1	:	:	:	:

Description

AT5G15910 (E=2e-108) | dehydrogenase-related

Coordinates

chrA02:+:3869952..3871707

Molecular Weight (calculated)

28768.8 Da

IEP (calculated)

10.562

GRAVY (calculated)

0.031

Length

271 amino acids

Sequence
(BLAST)

001: MFRSLIRARS QSSSSLVTMS SITQRGNSRP LTEAAGSHSR DKILVLGGNG YVGSHICKEA LRQGFSVSSL SRSGRSSLHD SWANDVTWHQ GDLLAPESLK
101: PALEGITSVI SCVGGFGSNS QMVRINGTAN INAVKAAAEG GVKRFVYISA ADYGVINNLI RGYFQGKRAT EAEILDKFGN RGTVLRPGFI HGTRQVGSIK
201: LPLSLIGAPL EMVLKLFPKE VTKIPLIGPL LIPPVSVKSV AGTAVKAAVD PEFASGVVDV YQILQHKTTP S

Best Arabidopsis Sequence Match ( AT5G15910.1 )
(BLAST)

001: MLRSLIWKRS QAYSSVVTMS SISQRGNERL LSEVAGSHSR DNKILVLGGN GYVGSHICKE ALRQGFSVSS LSRSGRSSLH DSWVDDVTWH QGDLLSPDSL
101: KPALEGITSV ISCVGGFGSN SQMVRINGTA NINAVKAAAE QGVKRFVYIS AADFGVINNL IRGYFEGKRA TEAEILDKFG NRGSVLRPGF IHGTRQVGSI
201: KLPLSLIGAP LEMVLKLLPK EVTKIPVIGP LLIPPVNVKS VAATAVKAAV DPEFASGVID VYRILQHGH

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q949S7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.