Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038371 | Potato | plastid | 92.68 | 61.49 |
| Solyc08g076450.2.1 | Tomato | plastid | 87.8 | 58.44 |
| VIT_02s0012g01900.t01 | Wine grape | plastid | 77.07 | 53.74 |
| KRH74352 | Soybean | plastid | 79.02 | 53.47 |
| KRH39581 | Soybean | mitochondrion, plastid | 77.07 | 52.15 |
| Os04t0403500-01 | Rice | plastid | 75.61 | 49.68 |
| Zm00001d000123_P003 | Maize | plastid | 74.15 | 49.67 |
| EES10717 | Sorghum | plastid | 74.15 | 49.67 |
| CDY64420 | Canola | plastid | 69.76 | 49.31 |
| Bra023250.1-P | Field mustard | plastid | 69.76 | 49.14 |
| CDY12254 | Canola | plastid | 69.27 | 48.8 |
| TraesCS2A01G290300.1 | Wheat | plastid | 73.17 | 48.39 |
| TraesCS2B01G306800.1 | Wheat | plastid | 73.17 | 48.39 |
| GSMUA_Achr4P12290_001 | Banana | plastid | 74.63 | 48.27 |
| AT1G32220.1 | Thale cress | plastid | 69.27 | 47.97 |
| TraesCS2D01G288200.1 | Wheat | plastid | 72.2 | 47.74 |
| HORVU2Hr1G071860.2 | Barley | plastid | 72.68 | 40.49 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400038370 | EnsemblPlantsGene:PGSC0003DMG402014805 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR12126 | PANTHER:PTHR12126:SF5 |
| PGSC:PGSC0003DMG402014805 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0002951837 | UniProt:M1B6R4 | MapMan:35.1 |
Description
3-beta hydroxysteroid dehydrogenase/isomerase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG402014805]
Coordinates
chr8:-:49089568..49092503
Molecular Weight (calculated)
22156.8 Da
IEP (calculated)
4.613
GRAVY (calculated)
0.252
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQVQKWEA MLCPAALPQV TGDVFYANWD EILIGATAVV STLGGFGSDE QMLRINGEAN VVAVNAAKEY GIPKFILISV HDYNLPSFLL QSGYFIGKRK
101: AESEVCSKFP SSGVVLRPAF IYGKRKVDGF EIPLDLIGEP LEKLLRATES FTKPLKSLPA SDLVLAPPVS VDDVAYAVIN AVKDDDCFGI FTIDQIKEAA
201: AGVKV
101: AESEVCSKFP SSGVVLRPAF IYGKRKVDGF EIPLDLIGEP LEKLLRATES FTKPLKSLPA SDLVLAPPVS VDDVAYAVIN AVKDDDCFGI FTIDQIKEAA
201: AGVKV
001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA
Arabidopsis Description
Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.