CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023250.1-P	Field mustard	plastid	97.59	97.25
CDY12254	Canola	plastid	96.9	96.56
AT1G32220.1	Thale cress	plastid	89.66	87.84
PGSC0003DMT400038370	Potato	cytosol	49.31	69.76
VIT_02s0012g01900.t01	Wine grape	plastid	70.69	69.73
KRH74352	Soybean	plastid	70.69	67.66
KRH39581	Soybean	mitochondrion, plastid	70.0	67.0
GSMUA_Achr4P12290_001	Banana	plastid	70.0	64.04
Zm00001d000123_P003	Maize	plastid	67.24	63.73
EES10717	Sorghum	plastid	66.21	62.75
Solyc08g076450.2.1	Tomato	plastid	66.55	62.66
Os04t0403500-01	Rice	plastid	66.21	61.54
PGSC0003DMT400038371	Potato	plastid	65.17	61.16
TraesCS2A01G290300.1	Wheat	plastid	64.14	60.0
TraesCS2B01G306800.1	Wheat	plastid	62.76	58.71
TraesCS2D01G288200.1	Wheat	plastid	62.41	58.39
HORVU2Hr1G071860.2	Barley	plastid	62.76	49.46
CDX85525	Canola	mitochondrion, plastid	36.9	39.48
CDX90965	Canola	mitochondrion	35.86	38.38
CDY40113	Canola	mitochondrion	34.48	34.6
CDY67689	Canola	mitochondrion	34.48	34.48
CDX97050	Canola	mitochondrion	34.14	34.38
CDX69807	Canola	mitochondrion	34.14	34.38
CDX97051	Canola	cytosol, extracellular, plastid	10.0	27.36

Protein Annotations

EnsemblPlants:CDY64420	EnsemblPlantsGene:GSBRNA2T00041209001	Gene3D:3.40.50.720	GO:A0A078JGD9	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf
PANTHER:PTHR12126	PANTHER:PTHR12126:SF5	PFAM:PF13460	ProteinID:CDY64420	ProteinID:CDY64420.1	SUPFAM:SSF51735
UniParc:UPI0004EE6619	UniProt:A0A078JGD9	MapMan:35.1	:	:	:

Description

BnaCnng43860DBnaCnng43860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGD9]

Coordinates

chrLK034460:-:1729..3704

Molecular Weight (calculated)

31416.8 Da

IEP (calculated)

5.897

GRAVY (calculated)

0.188

Length

290 amino acids

Sequence
(BLAST)

001: MSSFLSFPAI SPLPSAFSGA SFRHRSLSPR LFKSSVKCSY AEATIDIVAD VRSERVVVLG GNGFVGSAIC KEAISSGIEV VSVSRSGRPS LQDSWLDQVT
101: WVTGDVFYLN WDEVLLGATA VVSTIGGFGN EEQMKRINGE ANVIAVNAAK DFGVPKFVLI TVHDYNLPPF VLSSGYFTGK RCAEAELLSK YPNSGVVLRP
201: GFIYGKRKVN GFEVPLDLVG EPLDKIYDAA ERFIRPLRSL PASDLILAPP VKVDDLALAV INAIKDDDIF GIFTIEQIKE AAAKMRALSY

Best Arabidopsis Sequence Match ( AT1G32220.1 )
(BLAST)

001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA

Arabidopsis Description

Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.