CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39581	Soybean	mitochondrion, plastid	95.05	95.05
PGSC0003DMT400038370	Potato	cytosol	53.47	79.02
VIT_02s0012g01900.t01	Wine grape	plastid	73.6	75.85
CDY64420	Canola	plastid	67.66	70.69
Bra023250.1-P	Field mustard	plastid	67.66	70.45
CDY12254	Canola	plastid	67.66	70.45
Zm00001d000123_P003	Maize	plastid	69.97	69.28
PGSC0003DMT400038371	Potato	plastid	70.63	69.26
Os04t0403500-01	Rice	plastid	70.96	68.91
Solyc08g076450.2.1	Tomato	plastid	69.97	68.83
AT1G32220.1	Thale cress	plastid	67.0	68.58
EES10717	Sorghum	plastid	68.65	67.97
GSMUA_Achr4P12290_001	Banana	plastid	69.31	66.25
TraesCS2D01G288200.1	Wheat	plastid	66.67	65.16
TraesCS2B01G306800.1	Wheat	plastid	66.34	64.84
TraesCS2A01G290300.1	Wheat	plastid	66.34	64.84
HORVU2Hr1G071860.2	Barley	plastid	67.33	55.43
KRG88574	Soybean	cytosol	11.88	44.44
KRG88572	Soybean	cytosol, extracellular	15.18	38.66
KRG88578	Soybean	cytosol	13.2	37.74
KRH52293	Soybean	cytosol	16.17	37.12
KRH61625	Soybean	mitochondrion	33.33	35.19
KRG88571	Soybean	extracellular	5.61	30.91
KRH52291	Soybean	mitochondrion	25.41	29.84
KRG88575	Soybean	mitochondrion	6.93	22.83

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EMBL:ACUP02000018	EnsemblPlantsGene:GLYMA_01G014400	GO:GO:0003674	GO:GO:0003824
GO:GO:0003954	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0055114
GO:GO:1901006	UniProt:I1J4R0	EnsemblPlants:KRH74352	ProteinID:KRH74352	ProteinID:KRH74352.1	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR12126	PANTHER:PTHR12126:SF5	SUPFAM:SSF51735	UniParc:UPI00023374E8
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:1389107..1393444

Molecular Weight (calculated)

32617.0 Da

IEP (calculated)

6.795

GRAVY (calculated)

0.154

Length

303 amino acids

Sequence
(BLAST)

001: MASFLSFLPA VSARPIPTSA FSPKRPLFQT PPTLHFKNHR FAVSCSYAEA GVYANSSSNT IDVVADVRSE RIVVLGGNGF VGSSICKAAV SKGIEVISLS
101: RSGRPTYSGA WVDQVTWISG DVFYVNWDEV LVGATAVVST LGGFGSEEQM KRINGEANVV AVNAAKEYGI PKFILISVHD YNLPSFLLSS GYFTGKRKAE
201: SEVLSKYPNS GIVLRPAFIY GKRRVDGFEL PLDLVGEPAE KILRAVENFT KPLSSLPASD LLLAPPVSVD DVALAVINGV TDDDFFGIFT IDQIKEAANK
301: VRV

Best Arabidopsis Sequence Match ( AT1G32220.1 )
(BLAST)

001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA

Arabidopsis Description

Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.