Factsheet for Os04t0403500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000123_P003	Maize	plastid	79.17	80.72
TraesCS2B01G306800.1	Wheat	plastid	79.49	80.0
EES10717	Sorghum	plastid	78.21	79.74
TraesCS2D01G288200.1	Wheat	plastid	77.24	77.74
TraesCS2A01G290300.1	Wheat	plastid	75.64	76.13
PGSC0003DMT400038370	Potato	cytosol	49.68	75.61
KRH74352	Soybean	plastid	68.91	70.96
GSMUA_Achr4P12290_001	Banana	plastid	71.47	70.35
VIT_02s0012g01900.t01	Wine grape	plastid	66.03	70.07
KRH39581	Soybean	mitochondrion, plastid	67.95	69.97
Solyc08g076450.2.1	Tomato	plastid	67.31	68.18
PGSC0003DMT400038371	Potato	plastid	67.31	67.96
Bra023250.1-P	Field mustard	plastid	62.18	66.67
AT1G32220.1	Thale cress	plastid	63.14	66.55
CDY12254	Canola	plastid	61.86	66.32
CDY64420	Canola	plastid	61.54	66.21
HORVU2Hr1G071860.2	Barley	plastid	77.88	66.03
Os02t0556100-01	Rice	mitochondrion	33.65	35.96

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:4335739	EMBL:AK099117	EMBL:AK103149	ProteinID:BAF14613.1
ProteinID:BAS89060.1	ProteinID:CAD40678.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003954	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987
GO:GO:0010287	GO:GO:0055114	GO:GO:1901006	InterPro:NAD(P)-bd_dom	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os04g0403500
EnsemblPlants:Os04t0403500-01	PFAM:PF13460	PANTHER:PTHR12126	PANTHER:PTHR12126:SF5	UniProt:Q7XVF8	SUPFAM:SSF51735
UniParc:UPI000021C7E2	RefSeq:XP_015635436.1	SEG:seg	:	:	:

Description

NAD(P)-binding domain containing protein. (Os04t0403500-01);NAD(P)-binding domain containing protein. (Os04t0403500-02)

Coordinates

chr4:+:20015782..20019552

Molecular Weight (calculated)

33267.9 Da

IEP (calculated)

8.153

GRAVY (calculated)

0.109

Length

312 amino acids

Sequence
(BLAST)

001: MSPSPLLARP PAPSSPSTYP SLPPRRCAPA VASAALRVAP ATASRAPFSR LVTKRNFAAS DIREDYSTPI DVVADVKTEK IVVLGGSGFV GSAICKAAVS
101: KGIEVVSLSR SGRPSYSDPW VDQVTWLAGD VFYARWDEVL VGATAVVSTL GGFGNEEQMK RINGEANVTA VDAAKEFGIP KFILISVHDY NLPSFLLNSG
201: YFTGKRKAES EVLSKYPTSG VVLRPGFIYG KRKVDGFEIP LDVVGQPLEK LLSSVENFTK PLSSLPASDL LLAPPVSVDD VAYAVINGVI DDSFFGVFTI
301: EQIKEAAAKV RV

Best Arabidopsis Sequence Match ( AT1G32220.1 )
(BLAST)

001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA

Arabidopsis Description

Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.