Factsheet for GSMUA_Achr4P12290_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038370	Potato	cytosol	48.27	74.63
VIT_02s0012g01900.t01	Wine grape	plastid	67.19	72.45
EES10717	Sorghum	plastid	69.09	71.57
Os04t0403500-01	Rice	plastid	70.35	71.47
Zm00001d000123_P003	Maize	plastid	68.45	70.92
Bra023250.1-P	Field mustard	plastid	64.98	70.79
CDY12254	Canola	plastid	64.67	70.45
CDY64420	Canola	plastid	64.04	70.0
TraesCS2B01G306800.1	Wheat	plastid	68.45	70.0
TraesCS2A01G290300.1	Wheat	plastid	68.14	69.68
KRH39581	Soybean	mitochondrion, plastid	66.56	69.64
KRH74352	Soybean	plastid	66.25	69.31
AT1G32220.1	Thale cress	plastid	64.67	69.26
TraesCS2D01G288200.1	Wheat	plastid	67.51	69.03
Solyc08g076450.2.1	Tomato	plastid	66.56	68.51
PGSC0003DMT400038371	Potato	plastid	66.25	67.96
HORVU2Hr1G071860.2	Barley	plastid	67.82	58.42
GSMUA_Achr1P19070_001	Banana	plastid	35.33	39.3

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0009507	GO:GO:0009536	GO:GO:0009579
GO:GO:0010287	EnsemblPlantsGene:GSMUA_Achr4G12290_001	EnsemblPlants:GSMUA_Achr4P12290_001	EnsemblPlants:GSMUA_Achr4T12290_001	UniProt:M0SN94	InterPro:NAD(P)-bd_dom
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13460	PANTHER:PTHR12126	PANTHER:PTHR12126:SF5	SUPFAM:SSF51735	UniParc:UPI0002958534
SEG:seg	:	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:Projected from Arabidopsis thaliana (AT1G32220) TAIR;Acc:AT1G32220]

Coordinates

chr4:-:9089448..9095063

Molecular Weight (calculated)

34221.4 Da

IEP (calculated)

7.341

GRAVY (calculated)

0.169

Length

317 amino acids

Sequence
(BLAST)

001: MVAMSLWSFA SAPSLPSGRP PSLSTRSIPS PRPLSRSPSR PPSRVNVRCN YATSDLVEDS SSLPIDVVAD VKTEKIVVLG GNGFVGSAIC KAAVLKGIEV
101: VSVSRSGRPS YTDSWVDQVS WMAGIPLLHV LACDVFYLMW EEVLVGATAV VSTLGGFGNE EQMKRINGEA NILAVGAAKD FGVPKFILIS VHDYNLPSFL
201: LSSGYFIGKR KAESEVLSKY PRSGVVLRPG FIYGKRKVDG YEIPLDLIGE PLERLLLAAE NFTRPLKSLP ASDLLLAPPV SVDDVAYAVI NALMDDDFFG
301: VFTIEQIKEA AAKVRSR

Best Arabidopsis Sequence Match ( AT1G32220.1 )
(BLAST)

001: MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF
101: EDSWLDQVTW VTGDVFYLNW DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI LSNGYFTGKR NAEAELLSKY
201: PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA

Arabidopsis Description

Uncharacterized protein At1g32220, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FVR6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.