Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040953_P001 | Maize | mitochondrion, plastid | 39.62 | 21.99 |
| CDX69807 | Canola | mitochondrion | 50.0 | 18.4 |
| CDX97050 | Canola | mitochondrion | 50.0 | 18.4 |
| CDY40113 | Canola | mitochondrion | 49.06 | 17.99 |
| CDY67689 | Canola | mitochondrion | 49.06 | 17.93 |
| GSMUA_Achr1P19070_001 | Banana | plastid | 43.4 | 16.14 |
| HORVU5Hr1G073450.4 | Barley | mitochondrion | 40.57 | 14.63 |
| TraesCS5B01G162400.1 | Wheat | mitochondrion | 40.57 | 14.63 |
| Os02t0556100-01 | Rice | mitochondrion | 39.62 | 14.38 |
| TraesCS5A01G165800.1 | Wheat | golgi | 39.62 | 14.29 |
| CDX90965 | Canola | mitochondrion | 33.96 | 13.28 |
| CDX85525 | Canola | mitochondrion, plastid | 33.02 | 12.92 |
| EES00762 | Sorghum | mitochondrion, plastid | 42.45 | 11.06 |
| CDY64420 | Canola | plastid | 27.36 | 10.0 |
| CDY12254 | Canola | plastid | 27.36 | 9.97 |
Protein Annotations
| EnsemblPlants:CDX97051 | EnsemblPlantsGene:GSBRNA2T00104023001 | Gene3D:3.40.50.720 | PANTHER:PTHR12126 | PANTHER:PTHR12126:SF8 | ProteinID:CDX97051 |
| ProteinID:CDX97051.1 | UniParc:UPI0004EE2220 | MapMan:35.2 | : | : | : |
Description
BnaC09g45740D
Coordinates
chrLK031897:-:382901..383357
Molecular Weight (calculated)
11771.6 Da
IEP (calculated)
9.251
GRAVY (calculated)
0.322
Length
106 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKINGTADI NAIRAASEKG VKRFVYISAA DFGLAKYLLS GYYEGKPLLC QGTTNLTKVM SVKGLRMPVD LSCGQARNYR IIIFCFSCFS KHTVLIDVSV
101: CVYCIH
101: CVYCIH
001: MRTIVSRLIR YQSSLSQIRF VSASGGGRYL STDSNKIDEP FNVEEAETVH VPPPPTEKLL VLGGNGFVGS HVCKEALDRG LSVSSLSRSG RSSLQESWAS
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR
101: RVTWHQGNLL SSDLLKDALE GVTSVISCVG GFGSNSYMYK INGTANINAI RAASEKGVKR FVYISAADFG LANYLLRGYY EGKRAAETEL LTRFAYGGII
201: LRPGFIYGTR SVGSMKIPLG VFGSPMEMVL QQAKPLNQLP LVGPLFTPPV NVESVAKVAV RAATDPVFPP GIVDVHGIQR YSQQKSR
Arabidopsis Description
AT5g10730/MAJ23_90 [Source:UniProtKB/TrEMBL;Acc:Q93VH5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.