Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G272500.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 85.71 | 94.62 |
| TraesCS1B01G282400.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 85.71 | 94.62 |
| TraesCS1A01G272400.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 85.71 | 94.62 |
| Os05t0437200-01 | Rice | cytosol, plasma membrane, vacuole | 78.4 | 86.54 |
| EES18295 | Sorghum | plasma membrane | 77.35 | 83.77 |
| GSMUA_Achr6P19630_001 | Banana | plasma membrane | 68.99 | 78.26 |
| GSMUA_Achr5P01100_001 | Banana | plasma membrane | 67.6 | 76.08 |
| Zm00001d010174_P004 | Maize | golgi, peroxisome, plastid, vacuole | 69.69 | 76.05 |
| VIT_07s0031g02010.t01 | Wine grape | plasma membrane | 65.16 | 73.33 |
| KRH64114 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 64.81 | 72.09 |
| KRH53827 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 64.46 | 71.71 |
| Bra014012.1-P | Field mustard | peroxisome | 64.81 | 71.54 |
| CDY47858 | Canola | peroxisome | 64.81 | 71.54 |
| CDY36014 | Canola | peroxisome | 64.81 | 71.54 |
| PGSC0003DMT400050735 | Potato | plasma membrane | 62.02 | 70.08 |
| Solyc04g051340.2.1 | Tomato | plasma membrane | 61.32 | 69.29 |
| AT1G43130.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 62.37 | 68.58 |
| Zm00001d038319_P003 | Maize | plasma membrane | 76.31 | 66.36 |
| HORVU3Hr1G083110.1 | Barley | cytosol, peroxisome | 71.43 | 64.26 |
| HORVU1Hr1G081700.1 | Barley | mitochondrion | 50.17 | 42.86 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G075030.4 | EnsemblPlantsGene:HORVU1Hr1G075030 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DUF502 |
| PANTHER:PTHR31876 | PANTHER:PTHR31876:SF3 | PFAM:PF04367 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B47F695 |
| UniProt:A0A287G9H1 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:509577712..509582097
Molecular Weight (calculated)
32022.1 Da
IEP (calculated)
7.887
GRAVY (calculated)
0.316
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEEKEYVAV PMGQAPEPAD PEDPVKSPPR PTSPATSTRK ACFAVLQSWV SRKFMTGWYA LHELIHRSCK ACKLALPNIL FFVCSVVIFP MAVTFFITLW
101: FIRFFDGFFS PLYAKLGFDV FGLGFVTSLV FIFIVGIFVS SWVGSTVFWV GEWFIKKMPF VRHIYSASKQ VSTAVSPDQN TTAFKEVAII SHPRAGEYAF
201: GFITSSMILQ TDKGDEELCS VYVPTNHLYI GDIFLVNSAE IIRPNLSIRE GIEIIVSGGM TMPQVITALG PAPDKNQGTR LNRMMTV
101: FIRFFDGFFS PLYAKLGFDV FGLGFVTSLV FIFIVGIFVS SWVGSTVFWV GEWFIKKMPF VRHIYSASKQ VSTAVSPDQN TTAFKEVAII SHPRAGEYAF
201: GFITSSMILQ TDKGDEELCS VYVPTNHLYI GDIFLVNSAE IIRPNLSIRE GIEIIVSGGM TMPQVITALG PAPDKNQGTR LNRMMTV
001: MAEGKEATTS SLSQGLTPHQ DPDDAPKSPP NSPNSSTRKA CYGVLQSWVS KKFMTGFVVL FPVAVTFLIT WWFIQFVDGF FSPIYENLGV DIFGLGFITS
101: VLFTFFVGIF ASSWLGSTVF WLGEQFIRRM PFVKHIYSAS KQISTAISPD QNTTAFKEVA IIRHPRIGEY AFGFITSSVT LQTDHGEEEL CSVYVPTNHL
201: YIGDVFLVSS EEIIRPNLSI REGIEIIVSV GMTMPQVISH VDRTTNRTPH QHSLRVPLNR L
101: VLFTFFVGIF ASSWLGSTVF WLGEQFIRRM PFVKHIYSAS KQISTAISPD QNTTAFKEVA IIRHPRIGEY AFGFITSSVT LQTDHGEEEL CSVYVPTNHL
201: YIGDVFLVSS EEIIRPNLSI REGIEIIVSV GMTMPQVISH VDRTTNRTPH QHSLRVPLNR L
Arabidopsis Description
LCV2LCV2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDP4]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.