CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03944	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	84.53	86.82
Zm00001d010174_P004	Maize	golgi, peroxisome, plastid, vacuole	84.91	85.55
Os05t0437200-01	Rice	cytosol, plasma membrane, vacuole	83.77	85.38
TraesCS1D01G272500.1	Wheat	cytosol, plasma membrane, plastid, vacuole	82.26	83.85
TraesCS1B01G282400.1	Wheat	cytosol, plasma membrane, plastid, vacuole	82.26	83.85
TraesCS1A01G272400.1	Wheat	cytosol, plasma membrane, plastid, vacuole	82.26	83.85
GSMUA_Achr6P19630_001	Banana	plasma membrane	75.09	78.66
HORVU1Hr1G075030.4	Barley	cytosol, peroxisome, plasma membrane	83.77	77.35
GSMUA_Achr5P01100_001	Banana	plasma membrane	73.58	76.47
Zm00001d038319_P003	Maize	plasma membrane	93.58	75.15
Bra014012.1-P	Field mustard	peroxisome	72.83	74.23
CDY36014	Canola	peroxisome	72.83	74.23
VIT_07s0031g02010.t01	Wine grape	plasma membrane	71.32	74.12
CDY47858	Canola	peroxisome	72.08	73.46
KRH64114	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	71.32	73.26
KRH53827	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	70.94	72.87
PGSC0003DMT400050735	Potato	plasma membrane	68.68	71.65
AT1G43130.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	69.81	70.88
Solyc04g051340.2.1	Tomato	plasma membrane	67.92	70.87
EES19854	Sorghum	cytosol, peroxisome, plasma membrane	56.6	54.95
EES15972	Sorghum	golgi, peroxisome, vacuole	48.68	46.24
OQU84787	Sorghum	nucleus, peroxisome, plasma membrane	55.09	40.44

Protein Annotations

EnsemblPlants:EES18295	EnsemblPlantsGene:SORBI_3009G151700	EntrezGene:8077165	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0016020	GO:GO:0016021	InterPro:DUF502	PANTHER:PTHR31876
PANTHER:PTHR31876:SF3	PFAM:PF04367	ProteinID:EES18295	ProteinID:EES18295.1	RefSeq:XP_002439865.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0001A8880B	UniProt:C5YYP7	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr9:+:50803892..50814846

Molecular Weight (calculated)

29387.7 Da

IEP (calculated)

6.779

GRAVY (calculated)

0.275

Length

265 amino acids

Sequence
(BLAST)

001: MPEDKEYAPV PLGQAAAEAS AVAPDPEDPV KSPPRPSSPG TSTRKACFAV LQSWVSRKFM TGCVVLFPIA VTFFITWWFI QFVDGFFSPL YAKLGFDIFG
101: LGFLTSLLFI LLVGIFVSSW VGSTVFWVGE WFIKKMPFVR HIYSASKQVS TAVSPDQNTT AFKEVAIISH PRVGEYAFGF ITSTMVLQTD KGDEELCSVY
201: VPTNHLYIGD IFLVNSAEII RPNLSIREGI EIIVSGGMTM PQVITSLEPT PRKSQNIRLD RVRTV

Best Arabidopsis Sequence Match ( AT1G43130.1 )
(BLAST)

001: MAEGKEATTS SLSQGLTPHQ DPDDAPKSPP NSPNSSTRKA CYGVLQSWVS KKFMTGFVVL FPVAVTFLIT WWFIQFVDGF FSPIYENLGV DIFGLGFITS
101: VLFTFFVGIF ASSWLGSTVF WLGEQFIRRM PFVKHIYSAS KQISTAISPD QNTTAFKEVA IIRHPRIGEY AFGFITSSVT LQTDHGEEEL CSVYVPTNHL
201: YIGDVFLVSS EEIIRPNLSI REGIEIIVSV GMTMPQVISH VDRTTNRTPH QHSLRVPLNR L

Arabidopsis Description

LCV2LCV2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDP4]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.