Factsheet for VIT_07s0031g02010.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64114	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	86.67	85.66
KRH53827	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	86.27	85.27
Solyc04g051340.2.1	Tomato	plasma membrane	82.35	82.68
PGSC0003DMT400050735	Potato	plasma membrane	81.57	81.89
GSMUA_Achr6P19630_001	Banana	plasma membrane	80.39	81.03
GSMUA_Achr5P01100_001	Banana	plasma membrane	78.82	78.82
TraesCS3A01G379800.1	Wheat	endoplasmic reticulum, peroxisome, plastid, vacuole	78.82	77.61
TraesCS3B01G412400.1	Wheat	endoplasmic reticulum, peroxisome, plastid, vacuole	78.43	77.22
TraesCS3D01G372800.1	Wheat	endoplasmic reticulum, peroxisome, plastid, vacuole	78.82	76.43
EES03944	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	77.25	76.36
Zm00001d012269_P003	Maize	endoplasmic reticulum, peroxisome, plastid, vacuole	76.86	76.26
Bra014012.1-P	Field mustard	peroxisome	75.69	74.23
CDY36014	Canola	peroxisome	75.69	74.23
Os05t0437200-01	Rice	cytosol, plasma membrane, vacuole	74.9	73.46
CDY47858	Canola	peroxisome	74.51	73.08
AT1G43130.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	74.51	72.8
EES18295	Sorghum	plasma membrane	74.12	71.32
TraesCS1A01G272400.1	Wheat	cytosol, plasma membrane, plastid, vacuole	72.55	71.15
TraesCS1B01G282400.1	Wheat	cytosol, plasma membrane, plastid, vacuole	72.55	71.15
TraesCS1D01G272500.1	Wheat	cytosol, plasma membrane, plastid, vacuole	72.55	71.15
Zm00001d042718_P001	Maize	plastid	74.51	66.2
Zm00001d010174_P004	Maize	golgi, peroxisome, plastid, vacuole	67.45	65.4
HORVU1Hr1G075030.4	Barley	cytosol, peroxisome, plasma membrane	73.33	65.16
Os01t0867900-02	Rice	extracellular, plasma membrane	70.2	61.94
VIT_11s0016g03780.t01	Wine grape	plasma membrane	63.14	60.53
HORVU3Hr1G083110.1	Barley	cytosol, peroxisome	74.9	59.87
Zm00001d038319_P003	Maize	plasma membrane	72.16	55.76
VIT_18s0001g12380.t01	Wine grape	peroxisome	55.69	53.79

Protein Annotations

EntrezGene:100266324	wikigene:100266324	MapMan:35.1	ProteinID:CBI21550	ProteinID:CBI21550.3	UniProt:D7SWA1
InterPro:DUF502	EMBL:FN595233	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100266324	wikigene:LOC100266324	PFAM:PF04367
PANTHER:PTHR31876	PANTHER:PTHR31876:SF2	TMHMM:TMhelix	UniParc:UPI00015C9568	ArrayExpress:VIT_07s0031g02010	EnsemblPlantsGene:VIT_07s0031g02010
EnsemblPlants:VIT_07s0031g02010.t01	unigene:Vvi.419	RefSeq:XP_002278185	RefSeq:XP_002278185.1	SEG:seg	:

Description

No Description!

Coordinates

chr7:+:18143009..18152012

Molecular Weight (calculated)

28620.6 Da

IEP (calculated)

5.348

GRAVY (calculated)

0.188

Length

255 amino acids

Sequence
(BLAST)

001: MAEEKESTSV PLSQTGGNGG EDPEDPEKTP PASPNSSTRK ACCYFLQSWV SKKFMTGCVV LFPVAVTFFV TWWFIQFVDG FFSPLYERLG IDIFGLGFVT
101: SLLFVFFVGV FVSSWMGATV FWLGEWFIKR MPFVKHIYSA SKQISAAISP DQNTTAFKEV AIIRHPRVGE YAFGFITSTV ILQKENEDEE LCSVFVPTNH
201: LYIGDIFLVN SKEIIRPNLS IREGIEIIVS GGMTMPQTIA PLARPNDRIP LNRIM

Best Arabidopsis Sequence Match ( AT1G43130.1 )
(BLAST)

001: MAEGKEATTS SLSQGLTPHQ DPDDAPKSPP NSPNSSTRKA CYGVLQSWVS KKFMTGFVVL FPVAVTFLIT WWFIQFVDGF FSPIYENLGV DIFGLGFITS
101: VLFTFFVGIF ASSWLGSTVF WLGEQFIRRM PFVKHIYSAS KQISTAISPD QNTTAFKEVA IIRHPRIGEY AFGFITSSVT LQTDHGEEEL CSVYVPTNHL
201: YIGDVFLVSS EEIIRPNLSI REGIEIIVSV GMTMPQVISH VDRTTNRTPH QHSLRVPLNR L

Arabidopsis Description

LCV2LCV2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDP4]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.