Factsheet for GSMUA_Achr5P01100_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P19630_001	Banana	plasma membrane	89.8	90.51
EES03944	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane, plastid	83.53	82.56
Zm00001d012269_P003	Maize	endoplasmic reticulum, peroxisome, plastid, vacuole	82.35	81.71
TraesCS3D01G372800.1	Wheat	endoplasmic reticulum, peroxisome, plastid, vacuole	83.92	81.37
KRH64114	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	81.57	80.62
TraesCS3A01G379800.1	Wheat	endoplasmic reticulum, peroxisome, plastid, vacuole	81.57	80.31
TraesCS3B01G412400.1	Wheat	endoplasmic reticulum, peroxisome, plastid, vacuole	81.18	79.92
KRH53827	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	80.39	79.46
VIT_07s0031g02010.t01	Wine grape	plasma membrane	78.82	78.82
Os05t0437200-01	Rice	cytosol, plasma membrane, vacuole	79.22	77.69
PGSC0003DMT400050735	Potato	plasma membrane	75.29	75.59
Solyc04g051340.2.1	Tomato	plasma membrane	74.9	75.2
Bra014012.1-P	Field mustard	peroxisome	76.08	74.62
CDY36014	Canola	peroxisome	76.08	74.62
EES18295	Sorghum	plasma membrane	76.47	73.58
TraesCS1D01G272500.1	Wheat	cytosol, plasma membrane, plastid, vacuole	74.9	73.46
TraesCS1B01G282400.1	Wheat	cytosol, plasma membrane, plastid, vacuole	74.9	73.46
TraesCS1A01G272400.1	Wheat	cytosol, plasma membrane, plastid, vacuole	74.9	73.46
CDY47858	Canola	peroxisome	74.51	73.08
AT1G43130.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane, plastid	74.51	72.8
Zm00001d042718_P001	Maize	plastid	78.82	70.03
HORVU1Hr1G075030.4	Barley	cytosol, peroxisome, plasma membrane	76.08	67.6
Zm00001d010174_P004	Maize	golgi, peroxisome, plastid, vacuole	69.41	67.3
Os01t0867900-02	Rice	extracellular, plasma membrane	74.51	65.74
HORVU3Hr1G083110.1	Barley	cytosol, peroxisome	80.0	63.95
GSMUA_Achr6P22910_001	Banana	plasma membrane	63.14	62.65
GSMUA_Achr10P...	Banana	plasma membrane	61.96	58.09
Zm00001d038319_P003	Maize	plasma membrane	74.9	57.88
GSMUA_Achr3P15700_001	Banana	cytosol, peroxisome, plasma membrane	61.96	57.45
GSMUA_Achr8P27800_001	Banana	cytosol, endoplasmic reticulum, nucleus	61.18	56.93
GSMUA_Achr1P27070_001	Banana	golgi, peroxisome, plasma membrane	54.51	49.82

Protein Annotations

EnsemblPlants:GSMUA_Achr5P01100_001	EnsemblPlants:GSMUA_Achr5T01100_001	EnsemblPlantsGene:GSMUA_Achr5G01100_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DUF502	PANTHER:PTHR31876	PANTHER:PTHR31876:SF4	PFAM:PF04367	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002964BB9	UniProt:M0SUN9	MapMan:35.1	:	:	:

Description

COV1, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G01100_001]

Coordinates

chr5:-:637397..645350

Molecular Weight (calculated)

28466.4 Da

IEP (calculated)

6.921

GRAVY (calculated)

0.256

Length

255 amino acids

Sequence
(BLAST)

001: MAEEKESTSI PLSQAVDPED PAKSPPASPG SSTRKACCAV LHSWVSKKFL TGCVVLFPVA VTFYITWWFI QFVDGFFSPL YSKLGFDIFG LGFLTSLVFV
101: FLIGTFVSSW LGATVFWVGE WFIKRMPFVR HIYSASKQIS TAISPDQNTT AFKEVAIIRH PRIGEYAFGF ITSSVVFQSD NGEEELCSVY VPTNHLYIGD
201: IFLVKSEEII RPNLSVREGI EIIVSGGMTM PQLIAPLERI PSKNQSVRLN RITTQ

Best Arabidopsis Sequence Match ( AT1G43130.1 )
(BLAST)

001: MAEGKEATTS SLSQGLTPHQ DPDDAPKSPP NSPNSSTRKA CYGVLQSWVS KKFMTGFVVL FPVAVTFLIT WWFIQFVDGF FSPIYENLGV DIFGLGFITS
101: VLFTFFVGIF ASSWLGSTVF WLGEQFIRRM PFVKHIYSAS KQISTAISPD QNTTAFKEVA IIRHPRIGEY AFGFITSSVT LQTDHGEEEL CSVYVPTNHL
201: YIGDVFLVSS EEIIRPNLSI REGIEIIVSV GMTMPQVISH VDRTTNRTPH QHSLRVPLNR L

Arabidopsis Description

LCV2LCV2 [Source:UniProtKB/TrEMBL;Acc:A0A178WDP4]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.