Factsheet for GSMUA_Achr6P33050_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P15700_001
GSMUA_Achr6P22910_001
GSMUA_Achr8P27800_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G09690.1	GSMUA_Achr10P...	AT2G20130.1	21798944
AT3G09690.1	GSMUA_Achr3P15700_001	AT2G20130.1	21798944
AT3G09690.1	GSMUA_Achr6P22910_001	AT2G20130.1	21798944
AT3G09690.1	GSMUA_Achr8P27800_001	AT2G20130.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	77.93	76.86
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	65.61	62.03
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	65.81	61.98
VIT_06s0004g03310.t01	Wine grape	cytosol	59.84	61.3
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	65.01	61.12
Zm00001d047749_P001	Maize	cytosol	62.62	59.89
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	60.04	59.68
EER95045	Sorghum	cytosol	63.02	59.59
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	63.22	59.33
Zm00001d028727_P001	Maize	plasma membrane	61.63	58.16
Solyc09g007380.2.1	Tomato	cytosol	60.64	57.98
KRG89038	Soybean	cytosol, golgi, plastid	54.87	56.91
PGSC0003DMT400004379	Potato	cytosol	59.84	56.9
KRH19822	Soybean	cytosol	57.06	56.27
KRH32415	Soybean	endoplasmic reticulum	56.86	55.75
CDY71255	Canola	cytosol	34.39	55.1
CDY22195	Canola	cytosol, nucleus, plastid	56.06	54.44
CDY41305	Canola	cytosol, nucleus, plastid	56.26	54.42
KRH24928	Soybean	golgi, peroxisome, plasma membrane	55.27	54.09
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	55.47	53.65
AT5G02970.1	Thale cress	cytosol	54.47	53.31
AT3G09690.1	Thale cress	cytosol	55.67	53.13
CDY10412	Canola	cytosol	55.47	52.94
Solyc11g072440.1.1	Tomato	cytosol, peroxisome, plastid	56.86	52.87
PGSC0003DMT400070409	Potato	cytosol, peroxisome, plastid	57.06	52.85
CDX70335	Canola	cytosol	55.07	52.56
Bra009556.1-P	Field mustard	cytosol	54.87	52.37
HORVU4Hr1G056700.4	Barley	plastid	65.21	51.33
Os12t0535400-01	Rice	cytosol, plasma membrane	14.91	46.58
GSMUA_Achr11P...	Banana	cytosol	10.74	26.73
GSMUA_Achr11P...	Banana	cytosol	11.93	26.43
GSMUA_Achr11P...	Banana	endoplasmic reticulum, golgi, plasma membrane	18.69	26.26
GSMUA_Achr11P...	Banana	mitochondrion	19.28	26.15
GSMUA_Achr10P...	Banana	cytosol	4.17	24.71

Protein Annotations

EnsemblPlants:GSMUA_Achr6P33050_001	EnsemblPlants:GSMUA_Achr6T33050_001	EnsemblPlantsGene:GSMUA_Achr6G33050_001	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF994	PFAM:PF12697	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0002965908
UniProt:M0TC99	MapMan:35.2	:	:	:	:

Description

hydrolase, alpha/beta fold family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G33050_001]

Coordinates

chr6:-:32224462..32230049

Molecular Weight (calculated)

56531.2 Da

IEP (calculated)

4.953

GRAVY (calculated)

-0.258

Length

503 amino acids

Sequence
(BLAST)

001: MTWQDELASL VEDTGIRYGA GEGTGAAAEE SLKEQLTGFV MATGEMLREL GHGCWDIAQQ SLEGVEETYV GKKVKGHWTV ASQRLEFLNE YLPEDRDPVH
101: AWSVIVGVFL LALLVLSVNS GNETSVELPR KLYISPPGAS RIQLLDGRYV AYQEKGVPAE SARFCMIAPH SFLSSRFAGI PGVKESLLEE FGVRLVTYDL
201: PGFGESDPHL SRNLNSSAMD MLHLANALGV TDKFWVVGYS GGAMHAWAAV RYIPDRLAGV ALFAPMANPY DSSLNKEEIH KIWDKWTMKR KLMFVLARRI
301: PSLLSYFYHK SFLSGEYGQP EKWLSLSLGK KDKSLLEEPT FREFWEKDVS ESVRQGNPKP FIEEAVLQVS NWGFSLADLQ VQRQHQGKGL LSWLKSLYSQ
401: AEHEWAGFPG PIHIWQGMDD NVVPPSMTDF ARRMIPGATL HRLLGEGHLS YFCFCDDCHR QIFSALFGTP QGPLMIEPEV DQSLTEEYID EEETTLHNST
501: EQE

Best Arabidopsis Sequence Match ( AT5G02970.1 )
(BLAST)

001: MEEIRGVPTW QEELASLVDA GLRYDGAPID LTAATKRSGF VSADGSGSEP KETLKDQVTG FMKSWGEMLL ELAKGCKDIV QQTVVTDDSF LVRKLRKPAA
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYY8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.