Factsheet for Bra034078.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra041043.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G09690.1	Bra041043.1-P	AT2G20130.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71255	Canola	cytosol	59.81	99.04
CDY22195	Canola	cytosol, nucleus, plastid	98.08	98.46
CDY41305	Canola	cytosol, nucleus, plastid	98.27	98.27
AT3G09690.1	Thale cress	cytosol	83.08	81.97
Bra009556.1-P	Field mustard	cytosol	72.88	71.92
VIT_08s0040g02380.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	58.46	60.08
KRH19822	Soybean	cytosol	55.19	56.27
KRH32415	Soybean	endoplasmic reticulum	55.38	56.14
GSMUA_Achr6P33050_001	Banana	cytosol	53.65	55.47
Solyc09g007380.2.1	Tomato	cytosol	54.62	53.99
PGSC0003DMT400004379	Potato	cytosol	54.23	53.31
GSMUA_Achr9P04350_001	Banana	endoplasmic reticulum, extracellular, golgi	51.92	52.94
Zm00001d047749_P001	Maize	cytosol	53.27	52.66
EER95045	Sorghum	cytosol	53.27	52.07
TraesCS4B01G196600.1	Wheat	cytosol, nucleus, plasma membrane	52.69	51.5
TraesCS4D01G196900.1	Wheat	cytosol, peroxisome, plasma membrane	52.88	51.5
Os03t0288300-01	Rice	cytosol, endoplasmic reticulum, peroxisome	52.88	51.31
Zm00001d028727_P001	Maize	plasma membrane	52.5	51.22
TraesCS4A01G108000.1	Wheat	cytosol, peroxisome, plasma membrane	52.5	51.03
Os12t0535400-01	Rice	cytosol, plasma membrane	13.65	44.1
HORVU4Hr1G056700.4	Barley	plastid	52.31	42.57
Bra041127.1-P	Field mustard	cytosol	9.42	39.2
Bra018063.1-P	Field mustard	extracellular, golgi	18.65	27.17
Bra030720.1-P	Field mustard	nucleus	15.19	27.15
Bra005286.1-P	Field mustard	plastid	18.85	27.0
Bra038616.1-P	Field mustard	mitochondrion	18.08	26.93
Bra018636.1-P	Field mustard	cytosol	16.54	26.88
Bra006627.1-P	Field mustard	extracellular, golgi	17.31	26.32
Bra002413.1-P	Field mustard	endoplasmic reticulum, golgi	17.12	26.18
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	18.27	26.17
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	17.5	26.0
Bra020194.1-P	Field mustard	cytosol	12.5	24.62
Bra019541.1-P	Field mustard	cytosol, golgi, peroxisome	17.88	24.41
Bra021364.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	15.58	23.01
Bra019434.1-P	Field mustard	cytosol, mitochondrion	8.08	20.19
Bra034356.1-P	Field mustard	mitochondrion	18.85	15.29
Bra032005.1-P	Field mustard	endoplasmic reticulum, extracellular	15.96	13.05

Protein Annotations

EnsemblPlants:Bra034078.1	EnsemblPlants:Bra034078.1-P	EnsemblPlantsGene:Bra034078	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF994	PFAM:PF00561	SEG:seg	SUPFAM:SSF53474	UniParc:UPI0002544388
UniProt:M4EZ35	MapMan:35.2	:	:	:	:

Description

AT3G09690 (E=7e-252) | hydrolase, alpha/beta fold family protein

Coordinates

chrA01:-:27558903..27561180

Molecular Weight (calculated)

58613.6 Da

IEP (calculated)

5.653

GRAVY (calculated)

-0.364

Length

520 amino acids

Sequence
(BLAST)

001: MEEMRRGVPT WQEELASLMD GGLQYDDGSP IGQDSRSGFE SVVDGSGSGS ESTESLKDQV TGFMKSWGEM LMDLAVGCKD VVQQTLVSED SVVVRKLRKP
101: AAKLRFLNEY LPEDRDPAHA WPVIFFVFLI ALAALSFGSD NSTSVPVLKK LRLHPPGASR VELPDGRYLA YQELGVSSDR ARYSLIVPHS FMSSRLAGIP
201: GVKDSLLKDY GVRLVSYDLP GFGESDPHRG RNLSSSASDM IDLASALGIV EKFWLLGYSS GSMHAWAAMR YFPDRIAGVA MIAPMINPYE ASMSKEETAK
301: TWEQWPRKRK FKYFLARRWP SLLPFFYRRS FLSGYLQPLD QWMSISLGEK DKHVMRDPVF EEHYQRNVEE STRQGTAKPF VEEAVLHVSN WGFSLPDFRL
401: QKKCKANGVL SWLMSMYSES ECELVGFGKP IHIWQGMEDR VAPPSVTDYI SRVIPEATVH RLPNEGHFSY FFFCDECHKE IFSALFGEPQ GPVELTEERT
501: ETHEPDQPEI GSSNTSTTKG

Best Arabidopsis Sequence Match ( AT3G09690.1 )
(BLAST)

001: MEEMRRGVPT WQDELASLMD GGLQYDGSPI DLTADTESRS KSSGFESGSG SESVESLKDQ VTGFMKSWGE MLMDLAIGCK DVVQQMVVTD DSFVVRKLRK
101: PAAKVSKKLS FLNEYLPEDR DPVHAWPVIF FVFLLALTAL SFSSDHDRSV PLLKKIRLHP TSASRVQLPD GRYLAYQELG VSADRARHSL IVPHSFLSSR
201: LAGIPGVKES LLKDYGVRLV SYDLPGFGES DPHRARNLSS SASDMIDLAA ALGIVDKFWL LGYSSGSVHA WAAMRYFPDQ IAGVAMVAPM INPYEPSMTK
301: EEMAKTWEQW QRKRKFMYFL ARRWPSLLPF SYRRSFLSGN LEPLDKWMSV SLGEKDKLVT ADPVFEDLYQ RNVEESVRQG TAKPFVEEAA LQVSNWGFSL
401: PEFHMQKKCR TNGVLSWLMS MYSESECELI GFRKPIHIWQ GMDDRVTPPS VTDYISRVIP EATVHRLPNE GHFSYFYLCD ECHTQIFSAI FGEPKGPVEL
501: LEQRTETHRP DQPKTGLSDS SSLPKSK

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SF34]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.