Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
23508561
plasma membrane: 27341663 |
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95045 | Sorghum | cytosol | 94.0 | 94.17 |
| Zm00001d047749_P001 | Maize | cytosol | 90.99 | 92.21 |
| Os03t0288300-01 | Rice | cytosol, endoplasmic reticulum, peroxisome | 81.05 | 80.6 |
| TraesCS4A01G108000.1 | Wheat | cytosol, peroxisome, plasma membrane | 79.74 | 79.44 |
| TraesCS4D01G196900.1 | Wheat | cytosol, peroxisome, plasma membrane | 79.55 | 79.4 |
| TraesCS4B01G196600.1 | Wheat | cytosol, nucleus, plasma membrane | 79.17 | 79.32 |
| Os12t0535400-01 | Rice | cytosol, plasma membrane | 20.26 | 67.08 |
| HORVU4Hr1G056700.4 | Barley | plastid | 79.36 | 66.2 |
| GSMUA_Achr6P33050_001 | Banana | cytosol | 58.16 | 61.63 |
| GSMUA_Achr9P04350_001 | Banana | endoplasmic reticulum, extracellular, golgi | 58.16 | 60.78 |
| VIT_08s0040g02380.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 54.03 | 56.92 |
| VIT_06s0004g03310.t01 | Wine grape | cytosol | 52.35 | 56.82 |
| KRG89038 | Soybean | cytosol, golgi, plastid | 49.34 | 54.23 |
| PGSC0003DMT400070409 | Potato | cytosol, peroxisome, plastid | 54.41 | 53.41 |
| CDY22195 | Canola | cytosol, nucleus, plastid | 51.59 | 53.09 |
| Solyc11g072440.1.1 | Tomato | cytosol, peroxisome, plastid | 53.85 | 53.05 |
| CDY41305 | Canola | cytosol, nucleus, plastid | 51.59 | 52.88 |
| CDY71255 | Canola | cytosol | 30.96 | 52.55 |
| Bra034078.1-P | Field mustard | cytosol, nucleus, plastid | 51.22 | 52.5 |
| CDX70335 | Canola | cytosol | 51.41 | 51.99 |
| Bra009556.1-P | Field mustard | cytosol | 51.03 | 51.61 |
| AT5G02970.1 | Thale cress | cytosol | 49.72 | 51.56 |
| CDY10412 | Canola | cytosol | 50.66 | 51.23 |
| Solyc09g007380.2.1 | Tomato | cytosol | 50.47 | 51.14 |
| KRH32415 | Soybean | endoplasmic reticulum | 49.16 | 51.07 |
| AT3G09690.1 | Thale cress | cytosol | 50.28 | 50.85 |
| KRH24928 | Soybean | golgi, peroxisome, plasma membrane | 48.97 | 50.78 |
| KRH19822 | Soybean | cytosol | 48.22 | 50.39 |
| PGSC0003DMT400004379 | Potato | cytosol | 49.34 | 49.72 |
| Zm00001d042780_P001 | Maize | endoplasmic reticulum, vacuole | 19.14 | 28.33 |
| Zm00001d048565_P001 | Maize | cytosol | 18.76 | 28.09 |
| Zm00001d016696_P002 | Maize | extracellular, plasma membrane | 18.76 | 27.47 |
| Zm00001d029662_P001 | Maize | plastid | 19.32 | 26.89 |
| Zm00001d044704_P018 | Maize | plasma membrane | 19.51 | 26.4 |
| Zm00001d003800_P011 | Maize | extracellular | 18.76 | 24.45 |
| Zm00001d048503_P001 | Maize | mitochondrion | 18.57 | 17.68 |
Protein Annotations
| EMBL:BT033509 | EMBL:BT055202 | EnsemblPlants:Zm00001d028727_P001 | EnsemblPlants:Zm00001d028727_T001 | EnsemblPlantsGene:Zm00001d028727 | EntrezGene:100191424 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016787 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 | InterPro:IPR029058 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF994 | PFAM:PF12697 | ProteinID:ONL96868.1 | SEG:seg | SUPFAM:SSF53474 |
| UniParc:UPI00017B6063 | UniProt:B4F8S1 | MapMan:35.2 | : | : | : |
Description
alpha/beta-Hydrolases superfamily protein
Coordinates
chr1:+:44512777..44518048
Molecular Weight (calculated)
58710.6 Da
IEP (calculated)
4.966
GRAVY (calculated)
-0.238
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAAATMTWH EDLATLVGDT DVHLTGAGGH APAPADVTPA GAGWYGEEEE VRAEEGWAQQ AKGFAESTAE MLRELGRGLW DVAAQSLAGA EDSELGRRLR
101: KRAAATGERL SFMNEYLPEE RDPVRCWLIV AAVSFVTLLV LGAGNGNETP VELPKKLTIC PPSADRIQLP DGRHLAYEEQ GVSANRARFS LIAPHSFLSS
201: RLTGIPGISA SLLEEFGVRL VTYDLPGFGE SDPHIGRNLN SSALDMLYLA NALNIPEKFW VVGYSGGGMH AWSALHYIPD RIAGAAMFAP MANPYDSKMT
301: KDERSKTWDS WSTKRKLMHI LARRFPSLLP FFYRQTFLSG KQGQLESWLS LSLGKKDKTL LEGPVFNAFW ERNVAEAVRQ GDARPFVEEA VLQVSDWGFS
401: LSDIQMQKKE AGGFFELIKS LFNQAEREWV GFLGPIHIWQ GMDDRVVSPA VAEFVRRVVP GATVHKLLDE GHFSYFCFCD ECHRQIFSTL FGIPQGPINP
501: APPQPGEVVS ELTEETTVPD NATDEEQGKS GLP
101: KRAAATGERL SFMNEYLPEE RDPVRCWLIV AAVSFVTLLV LGAGNGNETP VELPKKLTIC PPSADRIQLP DGRHLAYEEQ GVSANRARFS LIAPHSFLSS
201: RLTGIPGISA SLLEEFGVRL VTYDLPGFGE SDPHIGRNLN SSALDMLYLA NALNIPEKFW VVGYSGGGMH AWSALHYIPD RIAGAAMFAP MANPYDSKMT
301: KDERSKTWDS WSTKRKLMHI LARRFPSLLP FFYRQTFLSG KQGQLESWLS LSLGKKDKTL LEGPVFNAFW ERNVAEAVRQ GDARPFVEEA VLQVSDWGFS
401: LSDIQMQKKE AGGFFELIKS LFNQAEREWV GFLGPIHIWQ GMDDRVVSPA VAEFVRRVVP GATVHKLLDE GHFSYFCFCD ECHRQIFSTL FGIPQGPINP
501: APPQPGEVVS ELTEETTVPD NATDEEQGKS GLP
001: MEEIRGVPTW QEELASLVDA GLRYDGAPID LTAATKRSGF VSADGSGSEP KETLKDQVTG FMKSWGEMLL ELAKGCKDIV QQTVVTDDSF LVRKLRKPAA
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT
101: KVSKKLSFLN EFLPEDRDPI HAWPVIFFVF LLALAALSFS PENDRPVTVI TKLRLHPTGA TRVQLPDGRY IAYQELGVSA ERARYSLVMP HSFLSSRLAG
201: IPGVKKSLLV EYGVRLVSYD LPGFGESDPH RGRNLSSSAS DMINLAAAIG IDEKFWLLGY STGSIHTWAG MKYFPEKIAG AAMVAPVINP YEPSMVKEEV
301: VKTWEQWLTK RKFMYFLARR FPILLPFFYR RSFLSGNLDQ LDQWMALSLG EKDKLLIKDP TFQEVYQRNV EESVRQGITK PFVEEAVLQV SNWGFTLSEF
401: RTQKKCATNG VLSWLMSMYS EAECELIGFR KPIHIWQGME DRVAPPSMSD YISRMIPEAT VHKIRNEGHF SFFYFCDECH RQIFYALFGE PKGQLERVKE
501: TEDTVVETEA HKDT
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYY8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.