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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 4
  • plastid 1
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, nucleus, plastid
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68922 Canola cytosol, mitochondrion 97.12 97.12
AT3G44510.2 Thale cress cytosol 84.13 53.85
GSMUA_Achr10P... Banana cytosol 19.23 47.06
Bra018636.1-P Field mustard cytosol 57.21 37.19
Bra030720.1-P Field mustard nucleus 50.0 35.74
KRH25210 Soybean cytosol 58.65 34.37
VIT_06s0080g00330.t01 Wine grape vacuole 56.25 33.62
KRH33263 Soybean extracellular, golgi 47.6 31.94
KRH30441 Soybean cytosol 33.17 28.05
Bra020194.1-P Field mustard cytosol 34.13 26.89
Bra018063.1-P Field mustard extracellular, golgi 38.46 22.41
Bra002413.1-P Field mustard endoplasmic reticulum, golgi 34.13 20.88
Bra014829.1-P Field mustard endoplasmic reticulum, golgi, vacuole 34.13 20.29
Bra006627.1-P Field mustard extracellular, golgi 33.17 20.18
Bra038616.1-P Field mustard mitochondrion 33.65 20.06
Bra019541.1-P Field mustard cytosol, golgi, peroxisome 36.54 19.95
Bra005286.1-P Field mustard plastid 33.65 19.28
Bra015923.1-P Field mustard endoplasmic reticulum, golgi 33.17 19.01
Bra034356.1-P Field mustard mitochondrion 55.29 17.94
Bra021364.1-P Field mustard endoplasmic reticulum, golgi, plastid 28.37 16.76
Bra032005.1-P Field mustard endoplasmic reticulum, extracellular 30.29 9.91
Bra009556.1-P Field mustard cytosol 22.6 8.92
Bra034078.1-P Field mustard cytosol, nucleus, plastid 20.19 8.08
Bra041127.1-P Field mustard cytosol 1.92 3.2
KRH17703 Soybean cytosol 0.96 1.67
Protein Annotations
EnsemblPlants:Bra019434.1EnsemblPlants:Bra019434.1-PEnsemblPlantsGene:Bra019434Gene3D:3.40.50.1820InterPro:AB_hydrolaseInterPro:IPR029058
PANTHER:PTHR10992PANTHER:PTHR10992:SF774SEG:segSUPFAM:SSF53474UniParc:UPI000253F1C9UniProt:M4DSE1
MapMan:35.2:::::
Description
AT3G44510 (E=8e-089) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, root; BEST Arabidopsis thaliana protein match is: esterase/lipase/thioesterase family protein (TAIR:AT1G08310.2); Has 177 Blast hits to 176 proteins in 15 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA06:-:13787181..13788567
Molecular Weight (calculated)
24286.4 Da
IEP (calculated)
8.453
GRAVY (calculated)
-0.275
Length
208 amino acids
Sequence
(BLAST)
001: MKFNRLAGVA MVAPVVNYRW PSIPKSLMKN DYRREVLKWS FWIAKYFPGL LHWWVTQNMF PTTSMLEKTP ANYFNDQDIE VLKHTKGFPM LSKERLREHG
101: VFETLRSDFL VAFADWDFDP ADLPDPFPSA REKSPSSVHI WQGYEDKVIP FQLQRCLCHK LAWIKYHEVS KGGHLIVHYE GVCDAILKSL LLGEDLPMYK
201: PKAVVTEP
Best Arabidopsis Sequence Match ( AT3G44510.2 )
(BLAST)
001: MEEHLQGRIK LHDGRYLAYK ERGVPKDDAK FTIVLVHGFG SSKDMNFNVS QELVNEIGIY FVLYDRAGYG ESDPNPKRSL KSEAYDVQEL ADGLEIGSRF
101: YLIGISMGSY TVWSCLKHIP QRLAGVAMVA PVVNFRWPSI PKSLMPKDYR REVAKWSVWI ANYFPGLLQW LVTQNMFSTT SMLEKNPVYF NDQDIEVLKH
201: IKGFPMLTKE KLRERGVFGT LRSDFLVAFG DWDFDPADLP DPSLSGPEKG SSSVHIWQGY EDKVMPFQLQ RCLCRKLPWI RYHEVPKGGH LIVHYDGICD
301: AILKSLLLGE DLPMYKPKAV ITEPA
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J341]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.