Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041127.1-P | Field mustard | cytosol | 33.54 | 87.2 |
| CDY72669 | Canola | cytosol | 33.23 | 86.4 |
| CDY70769 | Canola | cytosol | 32.92 | 85.6 |
| CDY68922 | Canola | cytosol, mitochondrion | 54.46 | 85.1 |
| CDY60542 | Canola | cytosol | 85.85 | 85.06 |
| Bra019434.1-P | Field mustard | cytosol, mitochondrion | 53.85 | 84.13 |
| AT1G08310.2 | Thale cress | cytosol | 61.85 | 63.21 |
| KRH25210 | Soybean | cytosol | 62.77 | 57.46 |
| KRH17703 | Soybean | cytosol | 20.92 | 56.67 |
| VIT_06s0080g00330.t01 | Wine grape | vacuole | 60.0 | 56.03 |
| KRH30441 | Soybean | cytosol | 39.38 | 52.03 |
| GSMUA_Achr10P... | Banana | cytosol | 12.0 | 45.88 |
| KRH33263 | Soybean | extracellular, golgi | 41.54 | 43.55 |
| AT5G22460.1 | Thale cress | endoplasmic reticulum | 43.08 | 41.18 |
| AT3G03240.1 | Thale cress | extracellular | 40.0 | 39.04 |
| AT3G03230.1 | Thale cress | extracellular | 39.69 | 38.74 |
| AT1G74300.1 | Thale cress | extracellular | 39.38 | 36.99 |
| AT3G54240.1 | Thale cress | extracellular, golgi, vacuole | 38.77 | 36.0 |
| AT2G36290.1 | Thale cress | plastid | 39.08 | 34.89 |
| AT1G74280.1 | Thale cress | golgi, mitochondrion | 38.46 | 33.6 |
| AT1G74290.1 | Thale cress | mitochondrion | 38.15 | 33.42 |
| AT3G48410.2 | Thale cress | mitochondrion | 42.15 | 32.08 |
| AT5G02970.1 | Thale cress | cytosol | 28.0 | 17.7 |
| AT3G09690.1 | Thale cress | cytosol | 28.0 | 17.27 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:823576 | InterPro:AB_hydrolase | ProteinID:AEE77909.1 | ArrayExpress:AT3G44510 |
| EnsemblPlantsGene:AT3G44510 | RefSeq:AT3G44510 | TAIR:AT3G44510 | RefSeq:AT3G44510-TAIR-G | EnsemblPlants:AT3G44510.2 | TAIR:AT3G44510.2 |
| Unigene:At.50246 | UniProt:F4J341 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0016787 |
| InterPro:Hydrolase_4 | InterPro:IPR029058 | RefSeq:NP_001190008.1 | PFAM:PF12146 | PO:PO:0000230 | PO:PO:0009005 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF774 | SUPFAM:SSF53474 | UniParc:UPI0001E92E2A | : | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J341]
Coordinates
chr3:-:16108100..16111316
Molecular Weight (calculated)
37155.9 Da
IEP (calculated)
7.280
GRAVY (calculated)
-0.262
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEHLQGRIK LHDGRYLAYK ERGVPKDDAK FTIVLVHGFG SSKDMNFNVS QELVNEIGIY FVLYDRAGYG ESDPNPKRSL KSEAYDVQEL ADGLEIGSRF
101: YLIGISMGSY TVWSCLKHIP QRLAGVAMVA PVVNFRWPSI PKSLMPKDYR REVAKWSVWI ANYFPGLLQW LVTQNMFSTT SMLEKNPVYF NDQDIEVLKH
201: IKGFPMLTKE KLRERGVFGT LRSDFLVAFG DWDFDPADLP DPSLSGPEKG SSSVHIWQGY EDKVMPFQLQ RCLCRKLPWI RYHEVPKGGH LIVHYDGICD
301: AILKSLLLGE DLPMYKPKAV ITEPA
101: YLIGISMGSY TVWSCLKHIP QRLAGVAMVA PVVNFRWPSI PKSLMPKDYR REVAKWSVWI ANYFPGLLQW LVTQNMFSTT SMLEKNPVYF NDQDIEVLKH
201: IKGFPMLTKE KLRERGVFGT LRSDFLVAFG DWDFDPADLP DPSLSGPEKG SSSVHIWQGY EDKVMPFQLQ RCLCRKLPWI RYHEVPKGGH LIVHYDGICD
301: AILKSLLLGE DLPMYKPKAV ITEPA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.