Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra041127.1-P | Field mustard | cytosol | 99.2 | 99.2 |
| CDY70769 | Canola | cytosol | 97.6 | 97.6 |
| KRH17703 | Soybean | cytosol | 56.8 | 59.17 |
| CDX77121 | Canola | mitochondrion | 66.4 | 38.78 |
| CDY60542 | Canola | cytosol | 100.0 | 38.11 |
| CDX71001 | Canola | extracellular | 58.4 | 33.64 |
| AT3G44510.2 | Thale cress | cytosol | 86.4 | 33.23 |
| KRH30441 | Soybean | cytosol | 51.2 | 26.02 |
| KRH25210 | Soybean | cytosol | 70.4 | 24.79 |
| VIT_06s0080g00330.t01 | Wine grape | vacuole | 64.8 | 23.28 |
| CDY31156 | Canola | cytosol | 60.8 | 23.1 |
| CDX93573 | Canola | cytosol | 58.4 | 22.96 |
| CDY30542 | Canola | mitochondrion | 67.2 | 21.82 |
| CDY09141 | Canola | endoplasmic reticulum, golgi | 58.4 | 21.41 |
| CDX88793 | Canola | extracellular, golgi | 58.4 | 21.34 |
| CDY26931 | Canola | endoplasmic reticulum, extracellular | 57.6 | 21.18 |
| CDX92349 | Canola | endoplasmic reticulum, golgi | 56.0 | 20.59 |
| CDY67187 | Canola | extracellular, golgi | 54.4 | 20.42 |
| CDY43140 | Canola | extracellular | 53.6 | 20.12 |
| CDY49719 | Canola | extracellular | 54.4 | 19.83 |
| CDY43139 | Canola | extracellular, golgi | 52.8 | 19.82 |
| CDY49934 | Canola | endoplasmic reticulum, golgi | 53.6 | 19.03 |
| CDY21214 | Canola | endoplasmic reticulum, golgi, plastid | 52.8 | 18.75 |
| CDY21213 | Canola | extracellular | 49.6 | 18.62 |
| CDY49935 | Canola | extracellular | 49.6 | 18.62 |
| CDX78221 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 17.6 | 18.49 |
| CDY67186 | Canola | extracellular | 46.4 | 18.35 |
| CDY41508 | Canola | cytosol, endoplasmic reticulum, golgi, mitochondrion | 52.0 | 18.26 |
| CDY39579 | Canola | cytosol, endoplasmic reticulum, peroxisome | 54.4 | 18.23 |
| CDY32828 | Canola | nucleus | 60.8 | 18.23 |
| CDX77906 | Canola | cytosol, golgi, peroxisome | 54.4 | 18.18 |
| CDX75055 | Canola | plastid | 52.8 | 18.18 |
| CDY21822 | Canola | cytosol, golgi, peroxisome | 55.2 | 18.11 |
| CDY65628 | Canola | cytosol, golgi, peroxisome | 51.2 | 17.98 |
| CDX84140 | Canola | plastid | 52.0 | 17.91 |
| CDY65400 | Canola | endoplasmic reticulum, golgi, vacuole | 48.0 | 17.14 |
| CDX76158 | Canola | endoplasmic reticulum, golgi, vacuole | 47.2 | 16.86 |
| CDX73073 | Canola | endoplasmic reticulum, golgi, mitochondrion, vacuole | 48.0 | 16.67 |
| CDX96530 | Canola | endoplasmic reticulum, golgi | 48.0 | 16.53 |
| CDY71255 | Canola | cytosol | 39.2 | 15.61 |
| CDX95073 | Canola | golgi, vacuole | 48.0 | 14.42 |
| KRH33263 | Soybean | extracellular, golgi | 32.0 | 12.9 |
| CDY35686 | Canola | endoplasmic reticulum, golgi | 58.4 | 12.87 |
| CDY22195 | Canola | cytosol, nucleus, plastid | 39.2 | 9.46 |
| CDY41305 | Canola | cytosol, nucleus, plastid | 39.2 | 9.42 |
| CDX70335 | Canola | cytosol | 39.2 | 9.3 |
| CDY10412 | Canola | cytosol | 39.2 | 9.3 |
| CDY68993 | Canola | plasma membrane | 5.6 | 3.74 |
| CDY68922 | Canola | cytosol, mitochondrion | 3.2 | 1.92 |
| GSMUA_Achr10P... | Banana | cytosol | 0.0 | 0.0 |
| CDX77120 | Canola | extracellular | 0.0 | 0.0 |
| CDY68104 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY72669 | EnsemblPlantsGene:GSBRNA2T00034416001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF774 | PFAM:PF12146 | ProteinID:CDY72669 | ProteinID:CDY72669.1 | SUPFAM:SSF53474 |
| UniParc:UPI0004EF3281 | UniProt:A0A078K173 | MapMan:35.2 | : | : | : |
Description
BnaCnng78730DBnaCnng78730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K173]
Coordinates
chrLK052576:+:278..945
Molecular Weight (calculated)
14185.8 Da
IEP (calculated)
7.501
GRAVY (calculated)
-0.574
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQPPNPQN RMKLRDGRYL AYKERGIPKD DAKFTIVLVH GFGSSKDMNF NVSQEFVEET GIYFVLYDRA GYGESDPNPK RSLKSEASDV QELADGLQIG
101: SRFYLIGISM GSYTVWSCLK HIPQR
101: SRFYLIGISM GSYTVWSCLK HIPQR
001: MGDSPASSNR VKLRDGRFLA YKERGVPKEK AKYKIILVHG FGSSKDMNFS ASKELIEELE VYLLFYDRSG YGASDSNTKR SLESEVEDIA ELADQLELGP
101: KFYLIGISMG SYPTWGCLRH IPHRLSGVAF VAPVVNYRWP SLPKKLIKKD YRTGIIKWGL RISKYAPGLL HWWIIQKLFA STSSVLESNP VYFNSHDIEV
201: LKRKTGFPML TKEKLRERNV FDTLRDDFMV CFGQWDFEPA DLSISTKSYI HIWHGKEDKV VPFQLQRCIL QKQPLINYHE IPQGGHLIVH YDGICDTILR
301: ALLLKEEQQK LYKIN
101: KFYLIGISMG SYPTWGCLRH IPHRLSGVAF VAPVVNYRWP SLPKKLIKKD YRTGIIKWGL RISKYAPGLL HWWIIQKLFA STSSVLESNP VYFNSHDIEV
201: LKRKTGFPML TKEKLRERNV FDTLRDDFMV CFGQWDFEPA DLSISTKSYI HIWHGKEDKV VPFQLQRCIL QKQPLINYHE IPQGGHLIVH YDGICDTILR
301: ALLLKEEQQK LYKIN
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRK8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.