CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72669	Canola	cytosol	38.78	66.4
CDY70769	Canola	cytosol	37.85	64.8
CDY30542	Canola	mitochondrion	91.59	50.91
CDX71001	Canola	extracellular	38.78	38.25
Bra034356.1-P	Field mustard	mitochondrion	91.59	30.58
CDX93573	Canola	cytosol	44.39	29.87
CDY31156	Canola	cytosol	44.86	29.18
CDY60542	Canola	cytosol	40.65	26.52
CDX88793	Canola	extracellular, golgi	40.65	25.44
CDY26931	Canola	endoplasmic reticulum, extracellular	39.72	25.0
Solyc01g009480.2.1	Tomato	cytosol	36.92	24.46
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	13.55	24.37
CDY09141	Canola	endoplasmic reticulum, golgi	38.78	24.34
PGSC0003DMT400030553	Potato	cytosol	36.45	24.15
Solyc01g009500.2.1	Tomato	cytosol	38.78	24.13
Solyc06g074330.2.1	Tomato	cytosol	38.78	24.13
CDY67187	Canola	extracellular, golgi	37.38	24.02
PGSC0003DMT400018400	Potato	extracellular	39.72	24.01
CDY43139	Canola	extracellular, golgi	36.92	23.72
CDY43140	Canola	extracellular	36.92	23.72
CDX92349	Canola	endoplasmic reticulum, golgi	37.38	23.53
PGSC0003DMT400030589	Potato	extracellular	38.78	23.45
CDY32828	Canola	nucleus	44.86	23.02
CDY21213	Canola	extracellular	35.51	22.82
CDY49935	Canola	extracellular	35.51	22.82
CDY49719	Canola	extracellular	35.98	22.45
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	36.92	21.94
CDY49934	Canola	endoplasmic reticulum, golgi	35.98	21.88
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	35.98	21.88
CDX75055	Canola	plastid	36.92	21.76
CDX77906	Canola	cytosol, golgi, peroxisome	37.85	21.66
CDY67186	Canola	extracellular	31.78	21.52
CDX84140	Canola	plastid	36.45	21.49
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	35.51	21.35
CDY65628	Canola	cytosol, golgi, peroxisome	35.05	21.07
CDY21822	Canola	cytosol, golgi, peroxisome	37.38	21.0
CDX96530	Canola	endoplasmic reticulum, golgi	35.51	20.94
CDX95073	Canola	golgi, vacuole	40.19	20.67
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	35.51	20.38
Solyc06g074340.2.1	Tomato	endoplasmic reticulum, golgi	33.18	20.11
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	32.24	19.71
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	31.78	19.43
CDY71255	Canola	cytosol	24.77	16.88
CDY35686	Canola	endoplasmic reticulum, golgi	39.25	14.81
CDY10412	Canola	cytosol	28.04	11.39
CDX70335	Canola	cytosol	28.04	11.39
CDY22195	Canola	cytosol, nucleus, plastid	26.64	11.0
CDY41305	Canola	cytosol, nucleus, plastid	26.64	10.96
CDY68993	Canola	plasma membrane	4.67	5.35
GSMUA_Achr10P...	Banana	cytosol	1.4	3.53
CDY68922	Canola	cytosol, mitochondrion	3.27	3.37
CDX77120	Canola	extracellular	3.74	2.23
CDY68104	Canola	cytosol	1.4	1.84

Protein Annotations

EnsemblPlants:CDX77121	EnsemblPlantsGene:GSBRNA2T00127721001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF774	PFAM:PF12697	ProteinID:CDX77121	ProteinID:CDX77121.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI0004EDE6F1	MapMan:35.2	:	:	:

Description

BnaC04g39160D

Coordinates

chrLK031809:-:1256700..1257750

Molecular Weight (calculated)

24107.0 Da

IEP (calculated)

9.890

GRAVY (calculated)

-0.402

Length

214 amino acids

Sequence
(BLAST)

001: MRRIGFHNLN QQRTRRILTS SSSSTVLPHL APSCQETILS PQDPKPKTDL PSSFSFLRET KPSISCPRNQ VTDSVNRVKL RDGRFLAYKE RGVPKNEAKY
101: KIILIHGFGS SKEMNFSASK ELIEELGVYF LLYDRAGYGD SDPNPERSLQ GEALDIEELA RKLQIGPKFY LIGVSMGSYP TWSCLKHIPH RVCLQASWSG
201: VCSSGRKLWV AVAF

Best Arabidopsis Sequence Match ( AT1G08310.1 )
(BLAST)

001: MGDSPASSNR VKLRDGRFLA YKERGVPKEK AKYKIILVHG FGSSKDMNFS ASKELIEELE VYLLFYDRSG YGASDSNTKR SLESEVEDIA ELADQLELGP
101: KFYLIGISMG SYPTWGCLRH IPHRLSGVAF VAPVVNYRWP SLPKKLIKKD YRTGIIKWGL RISKYAPGLL HWWIIQKLFA STSSVLESNP VYFNSHDIEV
201: LKRKTGFPML TKEKLRERNV FDTLRDDFMV CFGQWDFEPA DLSISTKSYI HIWHGKEDKV VPFQLQRCIL QKQPLINYHE IPQGGHLIVH YDGICDTILR
301: ALLLKEEQQK LYKIN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRK8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.