CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002413.1-P	Field mustard	endoplasmic reticulum, golgi	97.94	97.94
CDY26931	Canola	endoplasmic reticulum, extracellular	94.71	94.71
CDY09141	Canola	endoplasmic reticulum, golgi	83.82	83.58
AT5G22460.1	Thale cress	endoplasmic reticulum	79.71	79.71
CDY68104	Canola	cytosol	37.94	79.14
CDX88793	Canola	extracellular, golgi	78.82	78.36
CDX71001	Canola	extracellular	40.88	64.06
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	56.47	57.14
CDY72669	Canola	cytosol	20.59	56.0
CDY70769	Canola	cytosol	20.59	56.0
VIT_06s0080g00310.t01	Wine grape	extracellular	57.65	55.84
PGSC0003DMT400019164	Potato	extracellular, golgi	55.59	55.59
CDY43139	Canola	extracellular, golgi	51.47	52.55
CDY67187	Canola	extracellular, golgi	51.47	52.55
EES15681	Sorghum	golgi, plasma membrane, vacuole	53.24	52.16
CDY43140	Canola	extracellular	50.29	51.35
TraesCS5D01G136100.2	Wheat	golgi	52.35	51.3
TraesCS5A01G128500.2	Wheat	golgi	52.35	51.3
Os12t0152100-01	Rice	plasma membrane	50.59	50.15
CDY67186	Canola	extracellular	46.47	50.0
CDY49935	Canola	extracellular	48.53	49.55
CDY35686	Canola	endoplasmic reticulum, golgi	82.35	49.38
CDY21213	Canola	extracellular	48.24	49.25
Solyc11g067260.1.1	Tomato	plastid	55.29	48.7
CDY49719	Canola	extracellular	47.65	47.23
CDY49934	Canola	endoplasmic reticulum, golgi	47.94	46.31
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	47.65	46.02
HORVU5Hr1G042290.8	Barley	golgi	52.65	45.66
Zm00001d044704_P018	Maize	plasma membrane	52.65	45.43
CDX75055	Canola	plastid	48.24	45.18
CDX96530	Canola	endoplasmic reticulum, golgi	48.24	45.18
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	47.65	45.0
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	47.35	44.72
CDX84140	Canola	plastid	47.65	44.63
Os01t0859200-01	Rice	plasma membrane	45.29	44.38
EES01786	Sorghum	endoplasmic reticulum, extracellular	47.35	44.11
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	47.35	43.16
Os12t0152500-00	Rice	cytosol	20.0	42.77
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	44.71	42.7
CDY65628	Canola	cytosol, golgi, peroxisome	44.41	42.42
CDY60542	Canola	cytosol	40.59	42.07
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	43.24	42.0
CDY21822	Canola	cytosol, golgi, peroxisome	47.06	41.99
CDX77906	Canola	cytosol, golgi, peroxisome	46.18	41.98
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	42.94	41.71
CDY31156	Canola	cytosol	37.35	38.6
CDX93573	Canola	cytosol	35.0	37.42
CDX77121	Canola	mitochondrion	23.53	37.38
CDY30542	Canola	mitochondrion	41.18	36.36
CDY68922	Canola	cytosol, mitochondrion	20.59	33.65
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.18	31.93
CDY32828	Canola	nucleus	36.76	29.98
CDX95073	Canola	golgi, vacuole	33.82	27.64
CDY68993	Canola	plasma membrane	12.06	21.93
CDY71255	Canola	cytosol	17.06	18.47
CDY10412	Canola	cytosol	27.35	17.65
CDY41305	Canola	cytosol, nucleus, plastid	26.47	17.31
CDX70335	Canola	cytosol	26.76	17.27
CDY22195	Canola	cytosol, nucleus, plastid	26.18	17.18
CDX77120	Canola	extracellular	11.76	11.14

Protein Annotations

EnsemblPlants:CDX92349	EnsemblPlantsGene:GSBRNA2T00154084001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	PFAM:PF12697	ProteinID:CDX92349	ProteinID:CDX92349.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF53474	UniParc:UPI0004EEA0E5	MapMan:35.2	:	:

Description

BnaA10g13880D

Coordinates

chrLK031872:+:130429..132789

Molecular Weight (calculated)

38906.9 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.162

Length

340 amino acids

Sequence
(BLAST)

001: MMLPVIVAIV VCLASYIYRS LKPPPPRVCG VPHGPPITSP RIKLSDGRYL AYRESGVDRA SANHKIIVVH GFNNFKDMEL PISKDLVEEL GICFLFFDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLNIG PKFYVLGLSV GAYSVYSCLK YIPHRLAGAV LVVPFVSYWW TKVPQEILSK AFKLLPEDVR WTFRVAHYVP
201: WLLYWWLTQK WFSSSSIISG NSALLSDTDL VIIKKMLENP NPQTEKVRQQ GDHECLHRDM ITGFATWEFD PTELENPFTD GGGSVHMWQG TEDRFVPREI
301: NEYISKKLPW IKYHEVQGYG HLLSEEEQKC EDIIKALLVE

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.