CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92349	Canola	endoplasmic reticulum, golgi	94.71	94.71
CDY09141	Canola	endoplasmic reticulum, golgi	84.71	84.46
AT5G22460.1	Thale cress	endoplasmic reticulum	80.29	80.29
CDX88793	Canola	extracellular, golgi	79.41	78.95
CDY68104	Canola	cytosol	37.65	78.53
CDX71001	Canola	extracellular	41.76	65.44
CDY70769	Canola	cytosol	21.18	57.6
CDY72669	Canola	cytosol	21.18	57.6
PGSC0003DMT400019164	Potato	extracellular, golgi	55.88	55.88
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	55.0	55.65
VIT_06s0080g00310.t01	Wine grape	extracellular	57.35	55.56
CDY43139	Canola	extracellular, golgi	50.59	51.65
CDY67187	Canola	extracellular, golgi	50.59	51.65
EES15681	Sorghum	golgi, plasma membrane, vacuole	52.65	51.59
CDY43140	Canola	extracellular	49.41	50.45
TraesCS5A01G128500.2	Wheat	golgi	51.47	50.43
TraesCS5D01G136100.2	Wheat	golgi	51.47	50.43
CDY35686	Canola	endoplasmic reticulum, golgi	83.82	50.26
Os12t0152100-01	Rice	plasma membrane	50.0	49.56
Solyc11g067260.1.1	Tomato	plastid	55.88	49.22
CDY67186	Canola	extracellular	45.59	49.05
CDY49935	Canola	extracellular	47.94	48.95
CDY21213	Canola	extracellular	47.65	48.65
CDY49719	Canola	extracellular	47.35	46.94
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	48.53	45.83
CDY49934	Canola	endoplasmic reticulum, golgi	47.35	45.74
CDX96530	Canola	endoplasmic reticulum, golgi	48.82	45.73
CDX75055	Canola	plastid	48.82	45.73
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	47.06	45.45
CDX84140	Canola	plastid	48.24	45.18
Zm00001d044704_P018	Maize	plasma membrane	52.06	44.92
HORVU5Hr1G042290.8	Barley	golgi	51.76	44.9
Os01t0859200-01	Rice	plasma membrane	45.29	44.38
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	46.76	44.17
EES01786	Sorghum	endoplasmic reticulum, extracellular	46.76	43.56
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	47.06	42.9
Os12t0152500-00	Rice	cytosol	20.0	42.77
CDY60542	Canola	cytosol	41.18	42.68
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	44.41	42.42
CDY65628	Canola	cytosol, golgi, peroxisome	44.12	42.13
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	43.24	42.0
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	42.94	41.71
CDY21822	Canola	cytosol, golgi, peroxisome	46.47	41.47
CDX77906	Canola	cytosol, golgi, peroxisome	45.59	41.44
CDY31156	Canola	cytosol	38.53	39.82
CDX77121	Canola	mitochondrion	25.0	39.72
CDX93573	Canola	cytosol	36.18	38.68
CDY30542	Canola	mitochondrion	42.65	37.66
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	12.06	34.45
CDY68922	Canola	cytosol, mitochondrion	20.59	33.65
CDY32828	Canola	nucleus	37.65	30.7
CDX95073	Canola	golgi, vacuole	34.71	28.37
CDY68993	Canola	plasma membrane	12.65	22.99
CDY71255	Canola	cytosol	16.47	17.83
CDY10412	Canola	cytosol	27.35	17.65
CDY41305	Canola	cytosol, nucleus, plastid	26.76	17.5
CDX70335	Canola	cytosol	27.06	17.46
CDY22195	Canola	cytosol, nucleus, plastid	26.47	17.37
CDX77120	Canola	extracellular	12.35	11.7

Protein Annotations

EnsemblPlants:CDY26931	EnsemblPlantsGene:GSBRNA2T00036660001	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992
PANTHER:PTHR10992:SF886	PFAM:PF12697	ProteinID:CDY26931	ProteinID:CDY26931.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF53474	UniParc:UPI0004EBAE87	UniProt:A0A078GNN9	MapMan:35.2	:	:

Description

BnaC09g36520DBnaC09g36520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNN9]

Coordinates

chrLK032197:-:26124..29200

Molecular Weight (calculated)

38894.8 Da

IEP (calculated)

6.573

GRAVY (calculated)

-0.165

Length

340 amino acids

Sequence
(BLAST)

001: MMLSVIVAIL VCLASYIYRS LKPPPPRVCG VPHGPPITSP RIKLSDGRYL AYRESGVDRA NANHKIIVVH GFNNSKDMEL PISKDLIEEL GIYFLFFDRA
101: GYGESDPHPT RTVKSEAYDI QELADKLNIG PKFYVIGLSV GAYSVYSCLK YIPHRLAGAV LVVPFVSYWW TKVPQDISSK AFKLLPEDVR WTFRVAHYVP
201: WLLYWWLTHQ WFSSSSIISG NSALLSDTDL VIIKKMLENP SPHTEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFTE GVGSVHMWQG TEDRVVPREI
301: NEYISKKLPW IKYHEVQGYG HLLSEEEQKC EDIIKALLVE

Best Arabidopsis Sequence Match ( AT5G22460.1 )
(BLAST)

001: MMFSVTVAIL VCLIGYIYRS FKPPPPRICG HPNGPPVTSP RIKLSDGRYL AYRESGVDRD NANYKIIVVH GFNSSKDTEF PIPKDVIEEL GIYFVFYDRA
101: GYGESDPHPS RTVKSEAYDI QELADKLKIG PKFYVLGISL GAYSVYSCLK YIPHRLAGAV LMVPFVNYWW TKVPQEKLSK ALELMPKKDQ WTFKVAHYVP
201: WLLYWWLTQK LFPSSSMVTG NNALCSDKDL VVIKKKMENP RPGLEKVRQQ GDHECLHRDM IAGFATWEFD PTELENPFAE GEGSVHVWQG MEDRIIPYEI
301: NRYISEKLPW IKYHEVLGYG HLLNAEEEKC KDIIKALLVN

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FMQ5]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.