CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	golgi, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21822	Canola	cytosol, golgi, peroxisome	95.19	93.44
CDY49719	Canola	extracellular	76.2	83.09
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	79.95	80.16
AT3G48410.2	Thale cress	mitochondrion	76.74	67.21
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	60.96	64.04
CDY65628	Canola	cytosol, golgi, peroxisome	60.96	64.04
CDX75055	Canola	plastid	54.55	56.2
CDX84140	Canola	plastid	53.74	55.37
CDX96530	Canola	endoplasmic reticulum, golgi	52.94	54.55
CDY72669	Canola	cytosol	18.18	54.4
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	51.87	53.89
CDY70769	Canola	cytosol	17.91	53.6
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	43.85	46.86
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	43.58	46.57
CDX88793	Canola	extracellular, golgi	42.25	46.2
CDX92349	Canola	endoplasmic reticulum, golgi	41.98	46.18
CDY09141	Canola	endoplasmic reticulum, golgi	41.71	45.75
CDY26931	Canola	endoplasmic reticulum, extracellular	41.44	45.59
CDY68104	Canola	cytosol	19.52	44.79
CDY60542	Canola	cytosol	37.97	43.29
CDY67187	Canola	extracellular, golgi	38.5	43.24
CDY43139	Canola	extracellular, golgi	38.24	42.94
CDY43140	Canola	extracellular	37.97	42.64
CDY67186	Canola	extracellular	35.56	42.09
CDY49935	Canola	extracellular	36.9	41.44
CDY49934	Canola	endoplasmic reticulum, golgi	38.77	41.19
CDY21213	Canola	extracellular	36.63	41.14
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	38.5	40.91
CDX71001	Canola	extracellular	23.26	40.09
CDX93573	Canola	cytosol	33.16	38.99
CDY31156	Canola	cytosol	33.42	37.99
CDX77121	Canola	mitochondrion	21.66	37.85
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.5	36.13
CDY30542	Canola	mitochondrion	36.9	35.84
CDY68922	Canola	cytosol, mitochondrion	19.79	35.58
CDY32828	Canola	nucleus	32.62	29.26
CDX95073	Canola	golgi, vacuole	31.82	28.61
CDY68993	Canola	plasma membrane	14.17	28.34
CDY35686	Canola	endoplasmic reticulum, golgi	42.25	27.87
CDY71255	Canola	cytosol	16.04	19.11
CDY22195	Canola	cytosol, nucleus, plastid	24.33	17.57
CDY41305	Canola	cytosol, nucleus, plastid	24.06	17.31
CDY10412	Canola	cytosol	23.8	16.89
CDX70335	Canola	cytosol	23.53	16.7
CDX77120	Canola	extracellular	10.16	10.59

Protein Annotations

EnsemblPlants:CDX77906	EnsemblPlantsGene:GSBRNA2T00129131001	Gene3D:3.40.50.1820	GO:A0A078CL23	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1
InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740	PFAM:PF12697	ProteinID:CDX77906	ProteinID:CDX77906.1
SEG:seg	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI0004EEC2A0	MapMan:35.2	:

Description

BnaC03g53130D

Coordinates

chrLK031813:-:1891272..1893341

Molecular Weight (calculated)

42371.3 Da

IEP (calculated)

7.363

GRAVY (calculated)

-0.344

Length

374 amino acids

Sequence
(BLAST)

001: MSREGRDKKN KSEASTRSHT QARSSSDIFK TILLVVIVGS LAWFYKAIQP PPTGTVGSTG GASVTSPRIK LRDGRQLAYK EFGFPRDEAK FKIIYIHGFD
101: SCMLDSPFPQ FLSQALVEEL RIYTVSFDRP GYGESDPDPN RSPRSIALDI EELADGLGLG PNFYVVGLSM GGEITWTCLK YIPHRLAGAA LLGPVINYWW
201: RNLPRDITRE ALSLTSPADQ WALRVAHHAP WLTYWWNTQK WFPFSNVIAG NKVIFSRQDM EVVSKLGGFS PNLAYIRQQG EYESIHRDLK VGFSRWEFDP
301: LDLQDPFPNN NGSVHLWHGD EDRFVPVKLQ RYIASKLPWI HYHELSGSGY LLPYVEGLTD KITKSLLVGE EEST

Best Arabidopsis Sequence Match ( AT3G48410.2 )
(BLAST)

001: MFIYKDKKII KKLALKQRYC YCLTKFSSGK RVRKFPRERG ERMAGEEIER EKKSAASART HTRNNTQQSS SSGYLKTLLL VTFVGVLAWV YQTIQPPPAK
101: IVGSPGGPTV TSPRIKLRDG RHLAYTEFGI PRDEAKFKII NIHGFDSCMR DSHFANFLSP ALVEELRIYI VSFDRPGYGE SDPNLNGSPR SIALDIEELA
201: DGLGLGPQFY LFGYSMGGEI TWACLNYIPH RLAGAALVAP AINYWWRNLP GDLTREAFSL MHPADQWSLR VAHYAPWLTY WWNTQKWFPI SNVIAGNPII
301: FSRQDMEILS KLGFVNPNRA YIRQQGEYVS LHRDLNVAFS SWEFDPLDLQ DPFPNNNGSV HVWNGDEDKF VPVKLQRYVA SKLPWIRYHE ISGSGHFVPF
401: VEGMTDKIIK SLLVGEEDVS ESREASV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.