CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43139	Canola	extracellular, golgi	98.8	98.8
CDY67186	Canola	extracellular	89.19	93.99
CDY43140	Canola	extracellular	93.39	93.39
AT3G03240.1	Thale cress	extracellular	86.49	86.49
CDY21213	Canola	extracellular	73.27	73.27
CDY49935	Canola	extracellular	72.67	72.67
CDY21214	Canola	endoplasmic reticulum, golgi, plastid	73.87	69.89
CDY49934	Canola	endoplasmic reticulum, golgi	73.57	69.6
CDY72669	Canola	cytosol	20.42	54.4
CDY70769	Canola	cytosol	19.82	52.8
CDX92349	Canola	endoplasmic reticulum, golgi	52.55	51.47
CDX88793	Canola	extracellular, golgi	52.85	51.46
CDY09141	Canola	endoplasmic reticulum, golgi	52.25	51.03
KRH26627	Soybean	endoplasmic reticulum, extracellular, golgi	51.05	50.6
CDY26931	Canola	endoplasmic reticulum, extracellular	51.65	50.59
PGSC0003DMT400019164	Potato	extracellular, golgi	49.55	48.53
VIT_06s0080g00310.t01	Wine grape	extracellular	50.45	47.86
CDY68104	Canola	cytosol	23.42	47.85
CDX71001	Canola	extracellular	30.03	46.08
EES15681	Sorghum	golgi, plasma membrane, vacuole	46.85	44.96
TraesCS5D01G136100.2	Wheat	golgi	46.25	44.38
TraesCS5A01G128500.2	Wheat	golgi	45.95	44.09
Os12t0152100-01	Rice	plasma membrane	45.35	44.02
Os01t0859200-01	Rice	plasma membrane	44.44	42.65
CDY49719	Canola	extracellular	42.94	41.69
Solyc11g067260.1.1	Tomato	plastid	48.05	41.45
Os12t0152500-00	Rice	cytosol	19.52	40.88
HORVU5Hr1G042290.8	Barley	golgi	47.15	40.05
CDY60542	Canola	cytosol	38.44	39.02
CDY39579	Canola	cytosol, endoplasmic reticulum, peroxisome	43.24	38.61
CDX77906	Canola	cytosol, golgi, peroxisome	43.24	38.5
Zm00001d044704_P018	Maize	plasma membrane	45.35	38.32
CDX96530	Canola	endoplasmic reticulum, golgi	41.74	38.29
CDY65628	Canola	cytosol, golgi, peroxisome	40.84	38.2
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	40.84	38.2
EES01786	Sorghum	endoplasmic reticulum, extracellular	41.74	38.08
Zm00001d042780_P001	Maize	endoplasmic reticulum, vacuole	41.14	38.06
CDY21822	Canola	cytosol, golgi, peroxisome	43.24	37.8
CDX73073	Canola	endoplasmic reticulum, golgi, mitochondrion, vacuole	40.84	37.78
CDX77121	Canola	mitochondrion	24.02	37.38
CDX75055	Canola	plastid	39.94	36.64
CDX76158	Canola	endoplasmic reticulum, golgi, vacuole	38.44	36.57
CDX84140	Canola	plastid	39.64	36.36
CDY65400	Canola	endoplasmic reticulum, golgi, vacuole	38.14	36.29
CDX93573	Canola	cytosol	33.63	35.22
CDY31156	Canola	cytosol	34.23	34.65
CDY30542	Canola	mitochondrion	39.94	34.55
CDY35686	Canola	endoplasmic reticulum, golgi	51.95	30.51
CDY68922	Canola	cytosol, mitochondrion	18.32	29.33
CDY32828	Canola	nucleus	33.63	26.86
CDX95073	Canola	golgi, vacuole	32.13	25.72
CDX78221	Canola	endoplasmic reticulum, extracellular, plasma membrane	7.81	21.85
CDY68993	Canola	plasma membrane	11.41	20.32
CDY71255	Canola	cytosol	16.22	17.2
CDY10412	Canola	cytosol	26.13	16.51
CDY41305	Canola	cytosol, nucleus, plastid	25.23	16.15
CDX70335	Canola	cytosol	25.53	16.13
CDY22195	Canola	cytosol, nucleus, plastid	24.92	16.02
CDX77120	Canola	extracellular	10.21	9.47

Protein Annotations

EnsemblPlants:CDY67187	EnsemblPlantsGene:GSBRNA2T00059724001	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058
PANTHER:PTHR10992	PANTHER:PTHR10992:SF886	PFAM:PF12697	ProteinID:CDY67187	ProteinID:CDY67187.1	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF53474	UniParc:UPI0004EE1AC0	UniProt:A0A078JP83	MapMan:35.2	:

Description

BnaCnng53890DBnaCnng53890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JP83]

Coordinates

chrLK035844:-:6960..8438

Molecular Weight (calculated)

38626.9 Da

IEP (calculated)

7.168

GRAVY (calculated)

-0.196

Length

333 amino acids

Sequence
(BLAST)

001: MLLLVLVVGL ICYHVYKSIK PPPPIPLPEN VSEICPRVKL NDGRYLAYRE LGFPKDKAKN KIIILHGFGS SKLVDLKITQ EMIDEFEIYF LLFDRAGYGE
101: SDAHPSRTVK TDTYDIEELA DKLQIGPKFH VLGMSLGAYP VYGCLKYIPH RLSGATLVVP LLNFWWSSMP QSLLSAALKK LPIQNQWTFR VAHYLPWLLY
201: WWLTQKWFSP FSPNPRETMT ERDIELADKH TKHSYIKESA LRQGEYVSKH RDIIASFENW EFDPTELLNP FSDGNEGSVH MWCALEDKQI LREALLYICD
301: KLPWIKLRQV PEAGHLIIHE KQHFEDIIKT ACT

Best Arabidopsis Sequence Match ( AT3G03240.1 )
(BLAST)

001: MLFLTAAVCL ICFYVYKSVK PPPPIPLPEN VSEISPRIKL NDGRYLAYKE LGFPKDKAKN KIIILHGFGS SKLVDLKITQ EMIDEFEIYF LLFDRAGYGE
101: SDPHPSRTLK TDTYDIEELA DKLQIGPKFH VLGMSLGAYP VYGCLKYIPH RLSGATLVVP ILNFWWSCLP LNLSISAFKK LPIQNQWTLG VAHYFPWLLY
201: WWMTQKWFSP FSQNPRETMT ERDIELADKH TKHAYIKESA LRQGEYVSMQ RDIIAGYENW EFDPTELSNP FSDDNKGSVH IWCALEDKQI SHEVLLYLCD
301: KLPWIKLHEV PDAGHLIIHE KQHFEDIIKA ACS

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q501F6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.