Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018636.1-P | Field mustard | cytosol | 84.28 | 83.75 |
| CDX93573 | Canola | cytosol | 83.02 | 83.02 |
| Bra030720.1-P | Field mustard | nucleus | 70.13 | 76.63 |
| CDY31156 | Canola | cytosol | 79.25 | 76.6 |
| AT3G44510.2 | Thale cress | cytosol | 63.21 | 61.85 |
| CDY32828 | Canola | nucleus | 80.19 | 61.15 |
| CDX95073 | Canola | golgi, vacuole | 76.42 | 58.41 |
| Solyc06g074330.2.1 | Tomato | cytosol | 52.52 | 48.55 |
| Solyc01g009500.2.1 | Tomato | cytosol | 52.52 | 48.55 |
| PGSC0003DMT400030553 | Potato | cytosol | 48.74 | 47.99 |
| Solyc01g009480.2.1 | Tomato | cytosol | 48.74 | 47.99 |
| PGSC0003DMT400018400 | Potato | extracellular | 53.14 | 47.74 |
| PGSC0003DMT400030589 | Potato | extracellular | 51.89 | 46.61 |
| AT5G22460.1 | Thale cress | endoplasmic reticulum | 39.94 | 37.35 |
| GSMUA_Achr10P... | Banana | cytosol | 9.75 | 36.47 |
| AT3G03230.1 | Thale cress | extracellular | 38.05 | 36.34 |
| AT3G03240.1 | Thale cress | extracellular | 37.74 | 36.04 |
| Solyc06g074340.2.1 | Tomato | endoplasmic reticulum, golgi | 39.94 | 35.98 |
| AT2G36290.1 | Thale cress | plastid | 40.25 | 35.16 |
| AT1G74300.1 | Thale cress | extracellular | 38.05 | 34.97 |
| AT1G74290.1 | Thale cress | mitochondrion | 38.05 | 32.61 |
| AT3G54240.1 | Thale cress | extracellular, golgi, vacuole | 35.85 | 32.57 |
| AT1G74280.1 | Thale cress | golgi, mitochondrion | 37.42 | 31.99 |
| AT3G48410.2 | Thale cress | mitochondrion | 41.51 | 30.91 |
| AT5G02970.1 | Thale cress | cytosol | 27.04 | 16.73 |
| AT3G09690.1 | Thale cress | cytosol | 27.04 | 16.32 |
Protein Annotations
| Gene3D:3.40.50.1820 | MapMan:35.2 | EntrezGene:837351 | UniProt:A8MRK8 | InterPro:AB_hydrolase | InterPro:AB_hydrolase_1 |
| ProteinID:AEE28273.1 | ArrayExpress:AT1G08310 | EnsemblPlantsGene:AT1G08310 | RefSeq:AT1G08310 | TAIR:AT1G08310 | RefSeq:AT1G08310-TAIR-G |
| EnsemblPlants:AT1G08310.2 | TAIR:AT1G08310.2 | Unigene:At.42266 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016787 | InterPro:IPR029058 | RefSeq:NP_001077488.1 | PFAM:PF12697 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009047 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF774 | SUPFAM:SSF53474 | UniParc:UPI00015054B5 | SEG:seg | : |
Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A8MRK8]
Coordinates
chr1:+:2618647..2620452
Molecular Weight (calculated)
36812.6 Da
IEP (calculated)
9.402
GRAVY (calculated)
-0.319
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSPASSNR VKLRDGRFLA YKERGVPKEK AKYKIILVHG FGSSKDMNFS ASKFFQELIE ELEVYLLFYD RSGYGASDSN TKRSLESEVE DIAELADQLE
101: LGPKFYLIGI SMGSYPTWGC LRHIPHRLSG VAFVAPVVNY RWPSLPKKLI KKDYRTGIIK WGLRISKYAP GLLHWWIIQK LFASTSSVLE SNPVYFNSHD
201: IEVLKRKTGF PMLTKEKLRE RNVFDTLRDD FMVCFGQWDF EPADLSISTK SYIHIWHGKE DKVVPFQLQR CILQKQPLIN YHEIPQGGHL IVHYDGICDT
301: ILRALLLKEE QQKLYKIN
101: LGPKFYLIGI SMGSYPTWGC LRHIPHRLSG VAFVAPVVNY RWPSLPKKLI KKDYRTGIIK WGLRISKYAP GLLHWWIIQK LFASTSSVLE SNPVYFNSHD
201: IEVLKRKTGF PMLTKEKLRE RNVFDTLRDD FMVCFGQWDF EPADLSISTK SYIHIWHGKE DKVVPFQLQR CILQKQPLIN YHEIPQGGHL IVHYDGICDT
301: ILRALLLKEE QQKLYKIN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.