Factsheet for Bra038616.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41508	Canola	cytosol, endoplasmic reticulum, golgi, mitochondrion	98.28	96.35
CDY65628	Canola	cytosol, golgi, peroxisome	97.42	95.51
Bra018063.1-P	Field mustard	extracellular, golgi	65.9	64.43
Bra019541.1-P	Field mustard	cytosol, golgi, peroxisome	65.33	59.84
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	57.31	55.1
Bra005286.1-P	Field mustard	plastid	54.15	52.07
Bra041127.1-P	Field mustard	cytosol	18.62	52.0
Bra020194.1-P	Field mustard	cytosol	34.67	45.83
Bra002413.1-P	Field mustard	endoplasmic reticulum, golgi	43.55	44.71
Bra006627.1-P	Field mustard	extracellular, golgi	42.69	43.57
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	41.26	41.14
Bra021364.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	39.83	39.49
Bra018636.1-P	Field mustard	cytosol	35.53	38.75
Bra030720.1-P	Field mustard	nucleus	30.09	36.08
Bra019434.1-P	Field mustard	cytosol, mitochondrion	20.06	33.65
Bra034356.1-P	Field mustard	mitochondrion	39.54	21.53
Bra032005.1-P	Field mustard	endoplasmic reticulum, extracellular	38.11	20.91
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	26.93	18.08
Bra009556.1-P	Field mustard	cytosol	27.22	18.03

Protein Annotations

EnsemblPlants:Bra038616.1	EnsemblPlants:Bra038616.1-P	EnsemblPlantsGene:Bra038616	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740
PFAM:PF12697	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000253F24C
UniProt:M4FC00	MapMan:35.2	:	:	:	:

Description

AT3G48410 (E=6e-137) | hydrolase, alpha/beta fold family protein

Coordinates

chrA06:-:14200186..14201516

Molecular Weight (calculated)

40250.5 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.181

Length

349 amino acids

Sequence
(BLAST)

001: MSRGRRRTHT KFSFGVVRLV LSVGVLACVY QSVQPPPPKM FTAVTSPRIK LRDGRHLAYK ELGAPREEAK LKMIYIHGFD SCMHDSFFFH NLSPALLEEL
101: KICIVSFDRP GYGESDPDPN RTPRSIAFDI EELADGLGLG PKFYVIGFSM GGQIIWSCLH YIPHRLGGAA MVAPVVNYWW RNLPAKLSKE ALSLMLPRDR
201: WMLRVAHYAP WLTFWWNTQR WFSIASYISC DPNILSFQDK EIFSRLGFND LNQAYARKQG EYESLHRDLM IGYGHWEFDP LDVQNPFKNS NGSVHLWHGD
301: EDMFVPVSLQ RFIISKLPWV RYHELTGSGH FFPSLMVDEI VKTLFVGED

Best Arabidopsis Sequence Match ( AT3G48410.1 )
(BLAST)

001: MAGEEIEREK KSAASARTHT RNNTQQSSSS GYLKTLLLVT FVGVLAWVYQ TIQPPPAKIV GSPGGPTVTS PRIKLRDGRH LAYTEFGIPR DEAKFKIINI
101: HGFDSCMRDS HFANFLSPAL VEELRIYIVS FDRPGYGESD PNLNGSPRSI ALDIEELADG LGLGPQFYLF GYSMGGEITW ACLNYIPHRL AGAALVAPAI
201: NYWWRNLPGD LTREAFSLMH PADQWSLRVA HYAPWLTYWW NTQKWFPISN VIAGNPIIFS RQDMEILSKL GFVNPNRAYI RQQGEYVSLH RDLNVAFSSW
301: EFDPLDLQDP FPNNNGSVHV WNGDEDKFVP VKLQRYVASK LPWIRYHEIS GSGHFVPFVE GMTDKIIKSL LVGEEDVSES REASV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.