Factsheet for Bra019541.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, peroxisome
Any Predictor:	cytosol, golgi, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21822	Canola	cytosol, golgi, peroxisome	99.21	99.21
Bra018063.1-P	Field mustard	extracellular, golgi	76.38	81.51
AT3G48410.2	Thale cress	mitochondrion	76.64	68.38
Bra038616.1-P	Field mustard	mitochondrion	59.84	65.33
Bra005286.1-P	Field mustard	plastid	53.54	56.2
Bra041127.1-P	Field mustard	cytosol	18.37	56.0
Bra015923.1-P	Field mustard	endoplasmic reticulum, golgi	52.76	55.37
Bra020194.1-P	Field mustard	cytosol	33.86	48.86
Bra002413.1-P	Field mustard	endoplasmic reticulum, golgi	42.78	47.94
Bra014829.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	43.31	47.14
Bra006627.1-P	Field mustard	extracellular, golgi	41.99	46.78
Bra021364.1-P	Field mustard	endoplasmic reticulum, golgi, plastid	38.32	41.48
Bra018636.1-P	Field mustard	cytosol	34.12	40.62
Bra030720.1-P	Field mustard	nucleus	28.61	37.46
Bra019434.1-P	Field mustard	cytosol, mitochondrion	19.95	36.54
Bra032005.1-P	Field mustard	endoplasmic reticulum, extracellular	37.8	22.64
Bra034356.1-P	Field mustard	mitochondrion	37.53	22.31
Bra034078.1-P	Field mustard	cytosol, nucleus, plastid	24.41	17.88
Bra009556.1-P	Field mustard	cytosol	23.36	16.89

Protein Annotations

EnsemblPlants:Bra019541.1	EnsemblPlants:Bra019541.1-P	EnsemblPlantsGene:Bra019541	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AB_hydrolase	InterPro:AB_hydrolase_1	InterPro:IPR029058	PANTHER:PTHR10992	PANTHER:PTHR10992:SF740
PFAM:PF12697	SUPFAM:SSF53474	TMHMM:TMhelix	UniParc:UPI000253F005	UniProt:M4DSP8	MapMan:35.2

Description

AT3G48410 (E=2e-175) | hydrolase, alpha/beta fold family protein

Coordinates

chrA06:+:12370206..12371966

Molecular Weight (calculated)

43329.3 Da

IEP (calculated)

6.964

GRAVY (calculated)

-0.367

Length

381 amino acids

Sequence
(BLAST)

001: MCREGRDKKN KSEASTRSHT QARSSSDIFK TILLVVIVGS LAWFYKAIQP PTPRTIGSTS GAAVTWPRIK LRDGRHLAYK EFGFPRDEAK FKIIYIHGFD
101: SCMLDSPFPQ FLSQALVEEL RIYTVSFDRP GYGESDPDPN RSPRSIALDI EELADGLGLG PNFYVVGLSM GGEITWTCLK YIPHRLAGAA LLGPVINYWW
201: RNLPRDITRE AFSSTSPADQ WALRVAHHAP WLTYWWNTQK WFPFSNVISG NPVIFSRQDM EVVSKLGGFR PNLAYIRQQG EYESIHRDLK VGFSSWEFDP
301: LDLEDPFPNN NGSVHLWHGD EDRFVPVKLQ RYIASKLPWI HYHELSGSGH LLPYVEGLTD KITKSLLVGE EEVPESREAS A

Best Arabidopsis Sequence Match ( AT3G48410.2 )
(BLAST)

001: MFIYKDKKII KKLALKQRYC YCLTKFSSGK RVRKFPRERG ERMAGEEIER EKKSAASART HTRNNTQQSS SSGYLKTLLL VTFVGVLAWV YQTIQPPPAK
101: IVGSPGGPTV TSPRIKLRDG RHLAYTEFGI PRDEAKFKII NIHGFDSCMR DSHFANFLSP ALVEELRIYI VSFDRPGYGE SDPNLNGSPR SIALDIEELA
201: DGLGLGPQFY LFGYSMGGEI TWACLNYIPH RLAGAALVAP AINYWWRNLP GDLTREAFSL MHPADQWSLR VAHYAPWLTY WWNTQKWFPI SNVIAGNPII
301: FSRQDMEILS KLGFVNPNRA YIRQQGEYVS LHRDLNVAFS SWEFDPLDLQ DPFPNNNGSV HVWNGDEDKF VPVKLQRYVA SKLPWIRYHE ISGSGHFVPF
401: VEGMTDKIIK SLLVGEEDVS ESREASV

Arabidopsis Description

Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LMU3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.