Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G048550.1 | Barley | endoplasmic reticulum, plasma membrane | 96.47 | 95.69 |
| Os10t0521500-01 | Rice | endoplasmic reticulum, plasma membrane | 84.24 | 87.82 |
| TraesCS1A01G189200.1 | Wheat | mitochondrion | 98.37 | 82.27 |
| TraesCS1D01G187200.1 | Wheat | mitochondrion | 97.55 | 81.78 |
| Zm00001d029662_P001 | Maize | plastid | 81.79 | 78.59 |
| EER94631 | Sorghum | plastid | 80.16 | 72.84 |
| GSMUA_Achr11P... | Banana | cytosol | 33.7 | 61.39 |
| TraesCS1B01G197000.1 | Wheat | plastid | 57.34 | 59.1 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, plasma membrane | 56.79 | 58.38 |
| GSMUA_Achr11P... | Banana | cytosol | 35.87 | 58.15 |
| TraesCS4B01G356900.2 | Wheat | cytosol | 56.52 | 57.14 |
| VIT_15s0048g02060.t01 | Wine grape | plastid | 45.92 | 55.23 |
| VIT_15s0048g02050.t01 | Wine grape | cytosol | 49.18 | 55.18 |
| TraesCS2B01G310800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 40.22 | 41.11 |
| TraesCS6B01G191000.1 | Wheat | plastid | 40.76 | 40.65 |
| TraesCS4B01G196600.1 | Wheat | cytosol, nucleus, plasma membrane | 30.43 | 21.05 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G196900.1 | EnsemblPlantsGene:TraesCS1B01G196900 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF897 | PFAM:PF12146 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF53474 |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:354233585..354235033
Molecular Weight (calculated)
39774.6 Da
IEP (calculated)
8.460
GRAVY (calculated)
-0.066
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAASTGN GSPPVGLLVL MVLALAAGWF ANAVRPPTPT PCGAPGGPPV TAPRVRMRDG RFLAYAESGV SRDGARFKVV YSHGFSGSRM DSPRASQALL
101: EELGVYMVAF DRAGYGESDP DPRRSLQSAA LDIQDLADAL DLGDKFHLIC SSLGCHAGWA SVKYIPHRLA GVAMMAPVIN YRWSGLPRGL ARQLYRRQPL
201: GDQWSLRVAY YAPWLLHWWM SQPWLPTSTV VSGSGSFPNA LDEKNRLMAL STGMFQKRAQ AATQQGVQES FYRDMAVMFG RWTEFEPTDL GEAPPFPVHL
301: FQGDEDGVVP VQLQRHICRR LGWVSYHELA GVGHFLSAVP GLGDRIISTL LPGPAGNSST AAGSVCAY
101: EELGVYMVAF DRAGYGESDP DPRRSLQSAA LDIQDLADAL DLGDKFHLIC SSLGCHAGWA SVKYIPHRLA GVAMMAPVIN YRWSGLPRGL ARQLYRRQPL
201: GDQWSLRVAY YAPWLLHWWM SQPWLPTSTV VSGSGSFPNA LDEKNRLMAL STGMFQKRAQ AATQQGVQES FYRDMAVMFG RWTEFEPTDL GEAPPFPVHL
301: FQGDEDGVVP VQLQRHICRR LGWVSYHELA GVGHFLSAVP GLGDRIISTL LPGPAGNSST AAGSVCAY
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C915]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.