Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G196900.1 | Wheat | endoplasmic reticulum, plasma membrane | 82.27 | 98.37 |
| TraesCS1D01G187200.1 | Wheat | mitochondrion | 96.59 | 96.81 |
| HORVU1Hr1G048550.1 | Barley | endoplasmic reticulum, plasma membrane | 80.23 | 95.15 |
| Os10t0521500-01 | Rice | endoplasmic reticulum, plasma membrane | 70.45 | 87.82 |
| Zm00001d029662_P001 | Maize | plastid | 68.41 | 78.59 |
| EER94631 | Sorghum | plastid | 67.73 | 73.58 |
| GSMUA_Achr11P... | Banana | cytosol | 28.18 | 61.39 |
| TraesCS1A01G189300.1 | Wheat | plastid | 48.64 | 59.94 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, golgi, plasma membrane | 47.73 | 58.66 |
| GSMUA_Achr11P... | Banana | cytosol | 30.0 | 58.15 |
| TraesCS5A01G526300.3 | Wheat | cytosol | 47.73 | 57.85 |
| VIT_15s0048g02060.t01 | Wine grape | plastid | 38.41 | 55.23 |
| VIT_15s0048g02050.t01 | Wine grape | cytosol | 41.14 | 55.18 |
| TraesCS5A01G128500.2 | Wheat | golgi | 32.95 | 41.79 |
| TraesCS6A01G160400.1 | Wheat | plastid | 34.55 | 40.97 |
| TraesCS2A01G294400.1 | Wheat | plastid | 33.18 | 40.56 |
| TraesCS1A01G268900.1 | Wheat | plastid | 34.32 | 37.38 |
| TraesCS4A01G108000.1 | Wheat | cytosol, peroxisome, plasma membrane | 25.23 | 20.75 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G189200.1 | EnsemblPlantsGene:TraesCS1A01G189200 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:Hydrolase_4 | InterPro:IPR029058 |
| PANTHER:PTHR10992 | PANTHER:PTHR10992:SF897 | PFAM:PF12146 | SEG:seg | SUPFAM:SSF53474 | MapMan:35.2 |
Description
No Description!
Coordinates
chr1A:-:342391924..342393474
Molecular Weight (calculated)
47579.0 Da
IEP (calculated)
8.687
GRAVY (calculated)
-0.130
Length
440 amino acids
Sequence
(BLAST)
(BLAST)
001: MYTKYIGRSC PGLHYALHFL SAKCHRYSAA TSLAQYPPNT LSCPPPAPTT PHIPHIHFDK DPRAPAPPAS PPMAAAAAST GNGSPPVGLL VLMVLALAAG
101: WFANAVRPPP PTPCGAPGGP PVTAPRVRMR DGRFLAYAES GVSRDGARFK VVYSHGFSGS RMDSPRASQA LLEELGVYMV AFDRAGYGES DPDPRRSLES
201: AALDIQDLAD ALDLGDKFHL ICSSLGCHAG WASVKYIPHR LAGVAMMAPV INYRWSGLPR GLARQLYRRQ PLGDQWSLRV AYYAPWLLHW WMSQPWLPTS
301: TVVSGSGSFP NALDEKNRLM ALSTGMFQKR AQAATQQGVQ ESFYRDMAVM FGRWPEFEPT DLGEAPPFPV HLFQGDEDGV VPVQLQRHIC RRLGWVGYHE
401: LAGVGHFLSA VPGLGDRIIG TLLPGPAGNS STAVGSVCAY
101: WFANAVRPPP PTPCGAPGGP PVTAPRVRMR DGRFLAYAES GVSRDGARFK VVYSHGFSGS RMDSPRASQA LLEELGVYMV AFDRAGYGES DPDPRRSLES
201: AALDIQDLAD ALDLGDKFHL ICSSLGCHAG WASVKYIPHR LAGVAMMAPV INYRWSGLPR GLARQLYRRQ PLGDQWSLRV AYYAPWLLHW WMSQPWLPTS
301: TVVSGSGSFP NALDEKNRLM ALSTGMFQKR AQAATQQGVQ ESFYRDMAVM FGRWPEFEPT DLGEAPPFPV HLFQGDEDGV VPVQLQRHIC RRLGWVGYHE
401: LAGVGHFLSA VPGLGDRIIG TLLPGPAGNS STAVGSVCAY
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
Arabidopsis Description
Alpha/beta-Hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9C915]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.