Factsheet for Solyc04g054260.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033313	Potato	endoplasmic reticulum, extracellular	94.6	95.36
Solyc04g054250.2.1	Tomato	endoplasmic reticulum, extracellular	71.4	72.56
Solyc04g050620.2.1	Tomato	endoplasmic reticulum	69.0	69.84
Solyc12g042480.1.1	Tomato	nucleus	67.2	67.74
Solyc12g045020.1.1	Tomato	endoplasmic reticulum	64.6	65.52
Solyc04g011680.1.1	Tomato	endoplasmic reticulum, extracellular	62.4	62.53
Solyc04g011690.2.1	Tomato	endoplasmic reticulum, golgi	62.0	61.88
VIT_07s0031g01380.t01	Wine grape	mitochondrion	57.4	60.42
VIT_07s0031g01370.t01	Wine grape	plastid	44.6	59.31
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	58.4	58.63
Solyc04g054220.2.1	Tomato	extracellular, golgi	57.8	58.5
KRH59431	Soybean	endoplasmic reticulum, mitochondrion	56.6	56.94
KRH43296	Soybean	endoplasmic reticulum, mitochondrion	55.4	56.19
KRH43299	Soybean	endoplasmic reticulum, extracellular	55.0	55.22
KRH43298	Soybean	endoplasmic reticulum, golgi	54.2	54.2
Solyc04g083150.1.1	Tomato	nucleus	43.4	43.23
Solyc03g122360.2.1	Tomato	endoplasmic reticulum, golgi	37.6	37.15
Solyc03g122350.2.1	Tomato	endoplasmic reticulum	37.4	36.81
Solyc03g115220.2.1	Tomato	extracellular, golgi	35.6	34.63
Solyc11g066580.1.1	Tomato	endoplasmic reticulum, golgi	34.4	33.66
Solyc10g078230.1.1	Tomato	endoplasmic reticulum, extracellular	33.8	33.2
Solyc10g078220.1.1	Tomato	endoplasmic reticulum	33.6	33.2
Solyc11g030730.1.1	Tomato	endoplasmic reticulum, golgi	33.0	32.93
Solyc04g071820.2.1	Tomato	endoplasmic reticulum, golgi	32.4	32.14
Solyc04g071780.2.1	Tomato	endoplasmic reticulum, golgi	32.2	31.82
Solyc01g009370.1.1	Tomato	extracellular, golgi	32.2	31.76
Solyc04g071800.2.1	Tomato	endoplasmic reticulum, golgi	32.2	31.63
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	32.4	31.52
Solyc04g071790.1.1	Tomato	golgi	31.8	31.18
Solyc10g078240.1.1	Tomato	endoplasmic reticulum, extracellular	31.4	30.84
Solyc10g009390.2.1	Tomato	endoplasmic reticulum, extracellular	34.0	30.58

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	UniProt:K4BSI1	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086
PANTHER:PTHR24298	PANTHER:PTHR24298:SF157	SUPFAM:SSF48264	EnsemblPlantsGene:Solyc04g054260.2	EnsemblPlants:Solyc04g054260.2.1	TMHMM:TMhelix
UniParc:UPI000276561F	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:-:52221549..52223666

Molecular Weight (calculated)

57096.7 Da

IEP (calculated)

7.143

GRAVY (calculated)

-0.119

Length

500 amino acids

Sequence
(BLAST)

001: MALIMWTTLI VAIAMYIFHK LLNINHNKKL PPGPWGLPIL GHLHLIGKNP HQDFYKLAKR YGPFMHIQLG LVPTIVVSSP NTIEKVLKTY DHVFASRPHH
101: EASQHVCYGQ RNLIFSKYGP YWRNMRKLTT MNLVSSQKIN SYQPSRKEEV SLMVKSIKHV ADHNDQQHVV AVDLSAKVSS LNANLSCLMV FGKKFMDDDL
201: DKRGFKSLVQ EVVHLAATPN LGDFFPYLGV LDLQGITSRL KTLSKVFDEF LEKIIDEHVE SKEQRETKDF VDTMMDIMQS GEAGFEFDRR HVKAVLLDML
301: MASMDTSATS VEWILTELLR HPHVMKKLQK ELEQVVGLDR MVDESDLENL NYLDMVIKEA LRLHSAAPLL IHESIEDCVV DGFFVQKGSR IVVNVYAAQR
401: DPNAWPEPDK FLPERFVESS VDLRGHDFQL LPFGSGRRSC PGMQLGIIIV RLVVAQLVHC FDWELPNGMQ PSELDMSEQF GVVTCRAKHL MAIPTYRLQL

Best Arabidopsis Sequence Match ( AT4G36220.1 )
(BLAST)

001: MESSISQTLS KLSDPTTSLV IVVSLFIFIS FITRRRRPPY PPGPRGWPII GNMLMMDQLT HRGLANLAKK YGGLCHLRMG FLHMYAVSSP EVARQVLQVQ
101: DSVFSNRPAT IAISYLTYDR ADMAFAHYGP FWRQMRKVCV MKVFSRKRAE SWASVRDEVD KMVRSVSCNV GKPINVGEQI FALTRNITYR AAFGSACEKG
201: QDEFIRILQE FSKLFGAFNV ADFIPYFGWI DPQGINKRLV KARNDLDGFI DDIIDEHMKK KENQNAVDDG DVVDTDMVDD LLAFYSEEAK LVSETADLQN
301: SIKLTRDNIK AIIMDVMFGG TETVASAIEW ALTELLRSPE DLKRVQQELA EVVGLDRRVE ESDIEKLTYL KCTLKETLRM HPPIPLLLHE TAEDTSIDGF
401: FIPKKSRVMI NAFAIGRDPT SWTDPDTFRP SRFLEPGVPD FKGSNFEFIP FGSGRRSCPG MQLGLYALDL AVAHILHCFT WKLPDGMKPS ELDMNDVFGL
501: TAPKATRLFA VPTTRLICAL

Arabidopsis Description

CYP84A1Cytochrome P450 84A1 [Source:UniProtKB/Swiss-Prot;Acc:Q42600]
SUBAcon: [endoplasmic reticulum,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.