Factsheet for Solyc04g083150.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 6
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024894	Potato	endoplasmic reticulum, extracellular	92.83	91.91
KRH39218	Soybean	mitochondrion	30.48	52.4
KRH48459	Soybean	endoplasmic reticulum, extracellular	52.59	51.76
KRH48458	Soybean	endoplasmic reticulum	51.79	51.69
KRH39220	Soybean	mitochondrion	50.6	50.1
KRH39221	Soybean	endoplasmic reticulum	51.0	50.1
KRH48460	Soybean	endoplasmic reticulum, golgi	49.8	49.12
KRH39219	Soybean	mitochondrion	49.8	48.92
KRH39222	Soybean	endoplasmic reticulum, extracellular	49.0	48.91
KRH60326	Soybean	endoplasmic reticulum	48.41	46.91
Solyc04g011690.2.1	Tomato	endoplasmic reticulum, golgi	46.22	46.31
Solyc04g054250.2.1	Tomato	endoplasmic reticulum, extracellular	45.02	45.94
Solyc12g042480.1.1	Tomato	nucleus	45.02	45.56
Solyc04g050620.2.1	Tomato	endoplasmic reticulum	44.62	45.34
KRH39217	Soybean	golgi, mitochondrion	38.84	45.24
Solyc04g011680.1.1	Tomato	endoplasmic reticulum, extracellular	44.62	44.89
Solyc12g045020.1.1	Tomato	endoplasmic reticulum	43.43	44.22
Solyc04g054260.2.1	Tomato	endoplasmic reticulum, extracellular	43.23	43.4
VIT_17s0000g03940.t01	Wine grape	plasma membrane	51.2	42.98
Solyc04g054220.2.1	Tomato	extracellular, golgi	41.83	42.51
VIT_17s0000g03910.t01	Wine grape	cytosol	37.05	40.61
Solyc03g122360.2.1	Tomato	endoplasmic reticulum, golgi	36.06	35.77
Solyc04g071780.2.1	Tomato	endoplasmic reticulum, golgi	36.06	35.77
Solyc04g071820.2.1	Tomato	endoplasmic reticulum, golgi	35.86	35.71
Solyc04g071800.2.1	Tomato	endoplasmic reticulum, golgi	35.66	35.17
Solyc03g122350.2.1	Tomato	endoplasmic reticulum	35.26	34.84
Solyc03g115220.2.1	Tomato	extracellular, golgi	35.46	34.63
Solyc04g071790.1.1	Tomato	golgi	34.46	33.92
Solyc01g009370.1.1	Tomato	extracellular, golgi	33.07	32.74
Solyc11g030730.1.1	Tomato	endoplasmic reticulum, golgi	32.67	32.73
Solyc11g066580.1.1	Tomato	endoplasmic reticulum, golgi	33.27	32.68
Solyc10g009390.2.1	Tomato	endoplasmic reticulum, extracellular	35.66	32.19
Solyc10g078220.1.1	Tomato	endoplasmic reticulum	31.87	31.62
Solyc10g078230.1.1	Tomato	endoplasmic reticulum, extracellular	31.67	31.24
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	31.08	30.35
Solyc10g078240.1.1	Tomato	endoplasmic reticulum, extracellular	30.48	30.06
VIT_17s0000g03930.t01	Wine grape	endoplasmic reticulum, extracellular	41.04	20.87

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016705	GO:GO:0016709	GO:GO:0019031	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550
GO:GO:0046872	GO:GO:0055114	InterPro:HCV_env	InterPro:IPR036396	UniProt:K4BW29	PFAM:PD001388
PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF105
SUPFAM:SSF48264	EnsemblPlantsGene:Solyc04g083150.1	EnsemblPlants:Solyc04g083150.1.1	TMHMM:TMhelix	UniParc:UPI0002765E77	SEG:seg

Description

No Description!

Coordinates

chr4:+:54923922..54926574

Molecular Weight (calculated)

57040.6 Da

IEP (calculated)

6.679

GRAVY (calculated)

-0.037

Length

502 amino acids

Sequence
(BLAST)

001: MLSSIYVVVA FFSFLISLLF YFIHFRWTPE KLHRKLPPGP RGIPIIGNLH ILGTLPHRTL YNLSKTYGPI MFLKLGNIPT VIISSPETAE LVLRTHDAAF
101: ASRPKLKAIH YMSDGTKGLA FAAYGPQWRN NRKFCTQELL TAEKIGYSAG MRKEEIGVLV DEVKGFGGEL VNLGKKIGDL IGNMTYRMLF GDGNSERFDL
201: ENIVKEMVRL AGIFNVADYV PFLEPFDIQG LNKQLKEAGK RVQEVFDTII NEHEQDARNY THKSKNKDLV DIMLSYQDNP NSSYSIDRAT MKAILSDMIV
301: GAIDTSHTWI EWVFAEIIKH PTVMNKLQDE LTSIVGLDRM VEEDDLLKLE YLELVLKETF RLHPVAPLLV PRESIEDVVI SECYIPKGSR VMINCWALGH
401: DPNIWSDNVE EFIPERFIGK KKTDLRGHDF HLLPFGYGRR SCPGINLGLI TVKLIVAQLV HCFNWDLPDG IFPVDLDMTE KFGLAAPRAQ DLLVIPTYRL
501: LC

Best Arabidopsis Sequence Match ( AT5G04330.1 )
(BLAST)

001: MLTLMTLIVL VPLLLFLFPH LLLRRQMLLK PYPPGPKGLP VIGNILMMNQ FNHRGLAKLS RIYGGLLHLR LGFSHIFVVS SPDIARQVLQ VQDHVFSNRP
101: TTIAIRYLTY GGSDLAFCNY GPFWRRMRKL YVMMLFSRKR AESWVSVDEE VHKSVRLVAS NVGKPLNICK LAFSLSRDIT FRAAFGSSSS TSDESRLDEF
201: LEIIQEFSKL FGEFNVADYV PSWLSWIDPQ GINGRVEKAR KSLDGFIESV IDDHLHKKKR EHDNVDEETD MVDQLLAFYE EEVKVNNSVT KINLDNIKGI
301: IMDVMFGGTE TVALAIEWVL TEILRSPENM KRVQDELTSV VGLDRWRVED THLEKLTFLK CILKETLRLH PPFPLLLHET VKDTEISGYF IPKGSRVMVN
401: TYALGRDPNS WSDPESFNPG RFLNPIAPDL KGNNFEFVPF GSGRRSCPGM QLGLYAFELA VAHLLHCFTW SLPDGMNPGD VDTVEGPGLT VPKAIPLVAV
501: PTTRLLCPIV VS

Arabidopsis Description

CYP84A4Cytochrome P450 84A4 [Source:UniProtKB/Swiss-Prot;Acc:F4JW83]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.