CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 4
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH48459	Soybean	endoplasmic reticulum, extracellular	91.78	52.55
KRH39222	Soybean	endoplasmic reticulum, extracellular	69.18	40.16
KRH48458	Soybean	endoplasmic reticulum	66.44	38.57
KRH39221	Soybean	endoplasmic reticulum	66.44	37.96
KRH39219	Soybean	mitochondrion	64.73	36.99
KRH39220	Soybean	mitochondrion	64.04	36.88
KRH60326	Soybean	endoplasmic reticulum	60.27	33.98
VIT_17s0000g03910.t01	Wine grape	cytosol	52.4	33.41
KRH48460	Soybean	endoplasmic reticulum, golgi	56.16	32.22
KRH59431	Soybean	endoplasmic reticulum, mitochondrion	53.77	31.59
KRH43296	Soybean	endoplasmic reticulum, mitochondrion	52.4	31.03
KRH43298	Soybean	endoplasmic reticulum, golgi	53.08	31.0
KRH43299	Soybean	endoplasmic reticulum, extracellular	52.4	30.72
Solyc04g083150.1.1	Tomato	nucleus	52.4	30.48
PGSC0003DMT400024894	Potato	endoplasmic reticulum, extracellular	52.74	30.37
KRH39217	Soybean	golgi, mitochondrion	43.15	29.23
KRH03119	Soybean	endoplasmic reticulum	39.38	25.44
KRH47614	Soybean	endoplasmic reticulum	42.47	24.03
VIT_17s0000g03940.t01	Wine grape	plasma membrane	48.97	23.91
KRH06196	Soybean	endoplasmic reticulum	41.44	23.5
KRH56830	Soybean	endoplasmic reticulum	41.1	23.48
KRH54673	Soybean	extracellular, plasma membrane	40.41	23.0
KRH56827	Soybean	endoplasmic reticulum, plasma membrane, plastid	39.38	22.42
KRH56828	Soybean	endoplasmic reticulum, plasma membrane	39.04	22.27
KRH26218	Soybean	endoplasmic reticulum	39.73	22.18
KRH66683	Soybean	extracellular, golgi	36.3	20.83
KRG95042	Soybean	mitochondrion	36.3	20.83
KRG89698	Soybean	endoplasmic reticulum	36.64	20.78
KRH18622	Soybean	endoplasmic reticulum	32.53	20.34
VIT_17s0000g03930.t01	Wine grape	endoplasmic reticulum, extracellular	50.34	14.89

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EMBL:ACUP02005925	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EnsemblPlantsGene:GLYMA_09G186100	GO:GO:0003674	GO:GO:0003824	GO:GO:0004497
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016705
GO:GO:0020037	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	UniProt:K7LEQ6	EnsemblPlants:KRH39218
ProteinID:KRH39218	ProteinID:KRH39218.1	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086
PANTHER:PTHR24298	PANTHER:PTHR24298:SF105	SUPFAM:SSF48264	UniParc:UPI00023C89FD	:	:

Description

hypothetical protein

Coordinates

chr9:-:41100067..41100945

Molecular Weight (calculated)

33254.6 Da

IEP (calculated)

6.997

GRAVY (calculated)

-0.228

Length

292 amino acids

Sequence
(BLAST)

001: MCLIQSLAHQ GIVRRLKKVS KSFDVVLEQI IKDHEQSSDR EQKGQRQKDL VNIFLALMHQ PLDPQDEHGH VLDRTNIKAI MMTMIVAAID TSATTIEWAM
101: SELLKHPSVM KKLQDELECV EGMNRKVEES DMEKFPYLDL VVKETLRLYP VAPLLIPREC REDVTIDGYC IKKKSRIIVN AWAIGRDPKV WSDNAEVFYP
201: ERFANSNVDM RGYDFRLLPF GSGRRGCPGI HLGLTTVKIV LAQLVHCFNW ELPLGMSPDD LDMTEKFGLT IPRSNHLLAV PTYRLAGEVG KG

Best Arabidopsis Sequence Match ( AT2G45550.1 )
(BLAST)

001: MDIISGQALF LLFCFISSCF LISTTARSRR SSGRAATLPP GPPRLPIIGN IHQVGKNPHS SFADLAKIYG PIMSLKFGCL NSVVITSPEA AREVLRTHDQ
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N

Arabidopsis Description

CYP76C4Cytochrome P450 76C4 [Source:UniProtKB/Swiss-Prot;Acc:O64635]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.