Factsheet for VIT_17s0000g03940.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0031g01380.t01	Wine grape	mitochondrion	43.14	54.32
KRH39221	Soybean	endoplasmic reticulum	46.32	54.21
KRH48458	Soybean	endoplasmic reticulum	45.32	53.88
KRH39220	Soybean	mitochondrion	45.32	53.45
KRH39222	Soybean	endoplasmic reticulum, extracellular	44.82	53.28
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	44.15	53.01
KRH39219	Soybean	mitochondrion	44.82	52.45
VIT_07s0031g01370.t01	Wine grape	plastid	32.78	52.13
KRH48460	Soybean	endoplasmic reticulum, golgi	44.15	51.87
KRH60326	Soybean	endoplasmic reticulum	44.48	51.35
Solyc04g083150.1.1	Tomato	nucleus	42.98	51.2
KRH48459	Soybean	endoplasmic reticulum, extracellular	43.31	50.78
PGSC0003DMT400024894	Potato	endoplasmic reticulum, extracellular	42.81	50.49
KRH39218	Soybean	mitochondrion	23.91	48.97
KRH39217	Soybean	golgi, mitochondrion	34.28	47.56
VIT_17s0000g03910.t01	Wine grape	cytosol	35.79	46.72
VIT_09s0002g01090.t01	Wine grape	endoplasmic reticulum	32.94	38.55
VIT_06s0009g03010.t01	Wine grape	cytosol	16.05	37.94
VIT_11s0016g01020.t01	Wine grape	endoplasmic reticulum	30.27	35.56
VIT_11s0016g01050.t01	Wine grape	endoplasmic reticulum	30.1	35.36
VIT_06s0009g03140.t01	Wine grape	endoplasmic reticulum	29.77	34.83
VIT_17s0000g07210.t01	Wine grape	extracellular, golgi	29.6	34.77
VIT_06s0009g02860.t01	Wine grape	endoplasmic reticulum	28.6	33.66
VIT_15s0046g00330.t01	Wine grape	endoplasmic reticulum, golgi	29.26	33.4
VIT_11s0016g00980.t01	Wine grape	plastid	29.93	33.09
VIT_06s0009g02970.t01	Wine grape	endoplasmic reticulum	28.09	33.07
VIT_06s0009g02840.t01	Wine grape	endoplasmic reticulum	27.93	32.87
VIT_06s0009g02920.t01	Wine grape	mitochondrion	20.9	32.05
VIT_08s0007g05160.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	28.09	30.43
VIT_08s0040g00780.t01	Wine grape	extracellular, golgi	25.75	30.32
VIT_17s0000g07200.t01	Wine grape	cytosol, mitochondrion	22.07	29.27
VIT_17s0000g03930.t01	Wine grape	endoplasmic reticulum, extracellular	46.15	27.96

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ProteinID:CCB43204	ProteinID:CCB43204.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6GTJ5	EMBL:FN594950	GO:GO:0003674	GO:GO:0003676
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0006139
GO:GO:0006259	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015074
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748
GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF105	SUPFAM:SSF48264
TMHMM:TMhelix	UniParc:UPI0002108338	ArrayExpress:VIT_17s0000g03940	EnsemblPlantsGene:VIT_17s0000g03940	EnsemblPlants:VIT_17s0000g03940.t01	unigene:Vvi.18156
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr17:-:3886995..3898796

Molecular Weight (calculated)

67917.5 Da

IEP (calculated)

7.920

GRAVY (calculated)

0.138

Length

598 amino acids

Sequence
(BLAST)

001: MSLVFCLCLM FFDSTINLIR ICSFISEFMT LVHQCRETRY VFICKTLVDV ALFIILFHPC PITKPYPPYN NVWQYNIYIY GWPSIITSHI SNSTFPLSVP
101: MALFTVAILL VILGAMWVTL SHLKLRAGYR KLPPGPWGLP IIGSLYMLGS LPHRNLSRLA KKYGPIMFMR LGCVPTIVVS SPEAAKLVMK THDVVFASRP
201: KLQAYEYLSY GAKGIAFTEY GPYWRHVRKL CALHLFSSAK INSFASVRKA EVGLLVKSVK EMASAGEVVD ISAKVAGVVE DMAYRMVFGH NKDRIFDLKT
301: LIREATRLAG TFNLADYVPF LGPLDLQGLT QLLRTNNEAI DEVLDKIIDK HIQDVSKDEV NHMNFIDVVL SLMNKSNNFE DDPLYAIDRQ NAKAIILDIL
401: VGGIDSSITS IEWVISELLR HPRVMRRLQE ELKNVVGMCR MVEESDLENL GYLNMVVKET LRLHPIGPFL VPRESIEDIV INGHYIPKKS RILINTWTIG
501: RDPNVWSNNV EEFFPERFVE NNIDLQGHDF ELTPFGSGRR GCPGIQLGLI TVQLVVSQLV HCFNWKLPND TPPSELNMKE KFGLTMPRVD HLNIENLI

Best Arabidopsis Sequence Match ( AT3G26300.1 )
(BLAST)

001: MTNIWLLSLI FVICILVAVF NHKNRRNYQR TPPSPPGCPI IGNLHQLGEL PHQSLWKLSK KYGPVMLLKL GRVPTVIVSS SETAKQALKI HDLHCCSRPG
101: FAGARELSYN YLDIAFSPYD DYWKEVRKLA VQELFSSKQV HSIQPIKDEE VKKLIDSISE SAAQKTPINL NKTLLALTVS VVCRTAFSVN FEGTVLNSER
201: FNNIVREALE MLGSFSASDF IPYVGRIIDL LTGLQGRRER SMRDLDAFYE QMFDLHKQKK EEGSEDFVDL LLRLEKEEAV LGNDKLTRNH IKAILMDVLL
301: AGMDTSAITM TWAMAELAKN PRVMKKVQSE IRSQIKNKER ISFDDTDKLE YLKMVIKETW RLHPTTPLLI PREAMSEFEI NGYTIPVKTR LHVNVWAIGR
401: DPDTWKDPEV FLPERFTDNN IDAKGQHFEL LPFGGGRRMC PAVYMGTTMV EFGLANLLYH FDWKLPEGMK VDDIDMEEAP GLTVNKKNEL ILVPTKFLDP

Arabidopsis Description

CYP71B34Cytochrome P450 71B34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIP6]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.