Factsheet for VIT_06s0009g02920.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 5
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g03010.t01	Wine grape	cytosol	62.82	96.84
VIT_06s0009g02970.t01	Wine grape	endoplasmic reticulum	99.49	76.38
VIT_06s0009g02840.t01	Wine grape	endoplasmic reticulum	98.46	75.59
VIT_06s0009g02860.t01	Wine grape	endoplasmic reticulum	94.87	72.83
PGSC0003DMT400001124	Potato	cytosol, endoplasmic reticulum, plastid	76.67	66.89
TraesCS4A01G446300.1	Wheat	cytosol	35.13	65.87
KRH18622	Soybean	endoplasmic reticulum	70.77	59.1
Solyc11g066580.1.1	Tomato	endoplasmic reticulum, golgi	76.67	58.51
GSMUA_AchrUn_...	Banana	cytosol	47.95	58.44
VIT_06s0009g03140.t01	Wine grape	endoplasmic reticulum	72.56	55.38
KRG89698	Soybean	endoplasmic reticulum	70.51	53.4
VIT_08s0007g05160.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	71.79	50.72
GSMUA_Achr8P05810_001	Banana	endoplasmic reticulum	56.15	46.11
GSMUA_Achr2P00210_001	Banana	endoplasmic reticulum, plasma membrane	52.31	45.23
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, golgi	48.46	45.0
TraesCS4A01G446400.1	Wheat	endoplasmic reticulum, plasma membrane	58.46	44.62
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	53.33	44.07
TraesCS6D01G008100.1	Wheat	endoplasmic reticulum	57.95	44.05
TraesCS6A01G005400.1	Wheat	endoplasmic reticulum, plasma membrane	57.69	43.86
HORVU7Hr1G007580.1	Barley	endoplasmic reticulum, plasma membrane	58.21	43.82
TraesCS7D01G036900.1	Wheat	endoplasmic reticulum	57.18	43.81
GSMUA_Achr11P...	Banana	endoplasmic reticulum, vacuole	50.51	43.58
TraesCS7A01G041200.1	Wheat	endoplasmic reticulum, plasma membrane	57.18	43.55
GSMUA_Achr9P17300_001	Banana	endoplasmic reticulum, plasma membrane	52.82	43.55
TraesCS6B01G011200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	57.18	43.47
TraesCS6B01G011000.1	Wheat	endoplasmic reticulum	57.18	43.47
Zm00001d047424_P001	Maize	endoplasmic reticulum	58.72	43.45
EER94806	Sorghum	endoplasmic reticulum, plasma membrane	58.46	42.86
Zm00001d047425_P001	Maize	endoplasmic reticulum	57.44	42.67
VIT_17s0000g07200.t01	Wine grape	cytosol, mitochondrion	48.97	42.35
OQU92546	Sorghum	endoplasmic reticulum, plasma membrane	56.92	42.13
TraesCS2D01G504100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	51.54	39.33
TraesCS2B01G531600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	51.54	39.26
VIT_17s0000g07210.t01	Wine grape	extracellular, golgi	50.77	38.9
VIT_07s0031g01370.t01	Wine grape	plastid	33.08	34.31
VIT_11s0016g01050.t01	Wine grape	endoplasmic reticulum	39.74	30.45
VIT_11s0016g01020.t01	Wine grape	endoplasmic reticulum	38.97	29.86
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	37.69	29.52
VIT_09s0002g01090.t01	Wine grape	endoplasmic reticulum	38.21	29.16
VIT_07s0031g01380.t01	Wine grape	mitochondrion	34.62	28.42
VIT_17s0000g03910.t01	Wine grape	cytosol	33.33	28.38
VIT_11s0016g00980.t01	Wine grape	plastid	38.72	27.91
VIT_08s0040g00780.t01	Wine grape	extracellular, golgi	35.64	27.36
VIT_15s0046g00330.t01	Wine grape	endoplasmic reticulum, golgi	35.38	26.34
VIT_17s0000g03940.t01	Wine grape	plasma membrane	32.05	20.9
VIT_17s0000g03930.t01	Wine grape	endoplasmic reticulum, extracellular	24.87	9.83

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100853643	wikigene:100853643	MapMan:50.1.13	ProteinID:CCB49076	ProteinID:CCB49076.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6HA84	EMBL:FN595504
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	EntrezGene:LOC100853643	wikigene:LOC100853643	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463
ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF336	SUPFAM:SSF48264	UniParc:UPI00015CD619	ArrayExpress:VIT_06s0009g02920
EnsemblPlantsGene:VIT_06s0009g02920	EnsemblPlants:VIT_06s0009g02920.t01	:	:	:	:

Description

No Description!

Coordinates

chr6:+:15956471..15958286

Molecular Weight (calculated)

44149.6 Da

IEP (calculated)

6.747

GRAVY (calculated)

-0.203

Length

390 amino acids

Sequence
(BLAST)

001: MVFADYGARW KLLRKLSNLH MLGGKALEDW SQVRAVELGH MLRAMLELSQ RAEPVVVPEM LTFSMANMIG QVILSRRVFE TKGSESNEFK DMVVELMTTA
101: GYFNIGDFIP SIAWLDIQGI QHGMKHLHRK FDRLLTKMME EHTASAHERK GNPDFLDVIM ANQENSTGEK LTITNIKALL LNLFTAGTDT SSSVIEWSLA
201: EMLKNPSILK RAHEEMDQVI GRSRRLVESD LPKLPYLQAI CKESFRKHPS TPLNLPRVST QACEVNGYYI PENTRLSVNI WAIGRDPDVW ESPEEFRPER
301: FLSGRNEKID PRGNDFELIP FGAGRRICAG TRMGIVLVEY ILGTLVHSFD WKMPDGVEIN MDEAFGLALQ KAVSLSAMVT PRLHQSAYAV

Best Arabidopsis Sequence Match ( AT2G45550.1 )
(BLAST)

001: MDIISGQALF LLFCFISSCF LISTTARSRR SSGRAATLPP GPPRLPIIGN IHQVGKNPHS SFADLAKIYG PIMSLKFGCL NSVVITSPEA AREVLRTHDQ
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N

Arabidopsis Description

CYP76C4Cytochrome P450 76C4 [Source:UniProtKB/Swiss-Prot;Acc:O64635]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.