Factsheet for VIT_08s0040g00780.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g00540.t01
VIT_01s0137g00510.t01
VIT_01s0137g00540.t01
VIT_01s0137g00550.t01
VIT_01s0137g00560.t01
VIT_02s0025g00590.t01
VIT_02s0025g00640.t01
VIT_03s0038g02330.t01
VIT_06s0004g08150.t01	endoplasmic reticulum
VIT_06s0080g00310.t01
VIT_07s0031g02730.t01
VIT_08s0007g06170.t01
VIT_08s0040g00780.t01	endoplasmic reticulum
VIT_15s0046g01760.t01
VIT_15s0048g00220.t01
VIT_16s0098g01230.t01
VIT_16s0100g01280.t01
VIT_18s0001g00810.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40890.1	VIT_18s0001g00810.t01	AT1G20330.1	23175744
AT2G40890.1	VIT_08s0007g06170.t01	AT1G51570.1	23175744
AT2G40890.1	VIT_02s0025g00640.t01	AT1G64090.2	23175744
AT2G40890.1	VIT_07s0031g02730.t01	AT1G64090.2	23175744
AT2G40890.1	VIT_15s0046g01760.t01	AT1G64090.2	23175744
AT2G40890.1	VIT_01s0011g00540.t01	AT2G03510.1	23175744
AT2G40890.1	VIT_03s0038g02330.t01	AT2G20990.3	23175744
AT2G40890.1	VIT_06s0004g08150.t01	AT2G30490.1	23175744
AT2G40890.1	VIT_06s0004g08150.t01	AT2G30490.1	23175744
AT2G40890.1	VIT_08s0040g00780.t01	AT2G40890.1	23175744
AT2G40890.1	VIT_15s0048g00220.t01	AT2G45140.1	23175744
AT2G40890.1	VIT_02s0025g00590.t01	AT2G46170.1	23175744
AT2G40890.1	VIT_01s0137g00510.t01	AT3G26830.1	23175744
AT2G40890.1	VIT_01s0137g00540.t01	AT3G26830.1	23175744
AT2G40890.1	VIT_01s0137g00550.t01	AT3G26830.1	23175744
AT2G40890.1	VIT_01s0137g00560.t01	AT3G26830.1	23175744
AT2G40890.1	VIT_16s0100g01280.t01	AT3G48890.1	23175744
AT2G40890.1	VIT_06s0080g00310.t01	AT5G22460.1	23175744
AT2G40890.1	VIT_02s0025g00640.t01	AT5G41600.1	23175744
AT2G40890.1	VIT_07s0031g02730.t01	AT5G41600.1	23175744
AT2G40890.1	VIT_15s0046g01760.t01	AT5G41600.1	23175744
AT2G40890.1	VIT_16s0098g01230.t01	AT5G53560.1	23175744

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66683	Soybean	extracellular, golgi	86.22	86.05
KRG95042	Soybean	mitochondrion	86.02	85.85
PGSC0003DMT400008504	Potato	cytosol	35.04	85.58
Solyc01g096670.2.1	Tomato	endoplasmic reticulum, extracellular	83.46	82.49
AT2G40890.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	79.72	79.72
CDY22488	Canola	cytosol, mitochondrion	55.51	79.66
CDY35432	Canola	endoplasmic reticulum, extracellular, vacuole	79.53	79.53
Bra000211.1-P	Field mustard	endoplasmic reticulum, extracellular	79.13	79.13
CDY06955	Canola	endoplasmic reticulum	79.13	79.13
CDY14751	Canola	endoplasmic reticulum	78.74	78.74
Bra016964.1-P	Field mustard	endoplasmic reticulum	75.0	77.28
CDX79965	Canola	endoplasmic reticulum, extracellular, vacuole	75.79	75.94
PGSC0003DMT400018493	Potato	endoplasmic reticulum, extracellular	75.2	75.2
Bra004591.1-P	Field mustard	endoplasmic reticulum, extracellular	74.8	74.95
CDY23876	Canola	endoplasmic reticulum, extracellular	74.41	74.56
GSMUA_Achr8P24010_001	Banana	endoplasmic reticulum, extracellular	69.29	73.33
EES18431	Sorghum	endoplasmic reticulum	68.9	68.36
TraesCS1A01G310500.1	Wheat	golgi	68.9	68.36
Zm00001d038555_P001	Maize	plasma membrane	68.7	68.16
HORVU0Hr1G031710.1	Barley	endoplasmic reticulum	68.9	68.09
HORVU1Hr1G068030.1	Barley	endoplasmic reticulum	68.9	68.09
TraesCS1D01G310000.1	Wheat	endoplasmic reticulum	68.5	67.97
TraesCS1B01G321800.1	Wheat	endoplasmic reticulum	68.5	67.97
PGSC0003DMT400018494	Potato	endoplasmic reticulum, extracellular	67.52	67.39
PGSC0003DMT400075164	Potato	cytosol	59.45	66.96
EES03767	Sorghum	endoplasmic reticulum, extracellular	67.52	66.86
Os05t0494000-01	Rice	plasma membrane	67.32	66.8
TraesCS3B01G361900.1	Wheat	endoplasmic reticulum	66.73	66.6
PGSC0003DMT400038205	Potato	extracellular, golgi	66.34	66.47
Zm00001d043174_P001	Maize	mitochondrion	66.93	66.28
PGSC0003DMT400038202	Potato	extracellular, golgi	66.14	66.27
Os10t0196100-00	Rice	mitochondrion	31.3	66.25
HORVU3Hr1G078660.1	Barley	endoplasmic reticulum, extracellular	66.14	66.01
TraesCS3A01G331800.1	Wheat	endoplasmic reticulum	65.75	65.62
TraesCS3D01G325300.1	Wheat	endoplasmic reticulum	65.35	65.23
TraesCS5A01G554000.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	65.35	65.1
PGSC0003DMT400018497	Potato	endoplasmic reticulum, golgi	56.69	64.72
TraesCS4B01G393700.1	Wheat	extracellular, golgi	56.3	60.34
PGSC0003DMT400018498	Potato	endoplasmic reticulum, golgi	36.42	59.68
TraesCSU01G032400.1	Wheat	endoplasmic reticulum	31.69	59.63
TraesCSU01G032500.1	Wheat	cytosol, plasma membrane, plastid	61.61	58.18
GSMUA_Achr4P10110_001	Banana	endoplasmic reticulum, golgi	41.93	55.61
VIT_06s0009g03010.t01	Wine grape	cytosol	21.46	43.08
VIT_09s0002g01090.t01	Wine grape	endoplasmic reticulum	37.01	36.79
VIT_11s0016g01020.t01	Wine grape	endoplasmic reticulum	36.61	36.54
VIT_11s0016g01050.t01	Wine grape	endoplasmic reticulum	36.42	36.35
VIT_06s0009g02920.t01	Wine grape	mitochondrion	27.36	35.64
VIT_17s0000g07210.t01	Wine grape	extracellular, golgi	35.04	34.97
VIT_15s0046g00330.t01	Wine grape	endoplasmic reticulum, golgi	35.63	34.54
VIT_11s0016g00980.t01	Wine grape	plastid	36.22	34.01
VIT_06s0009g02970.t01	Wine grape	endoplasmic reticulum	33.27	33.27
VIT_06s0009g02860.t01	Wine grape	endoplasmic reticulum	33.27	33.27
VIT_07s0031g01380.t01	Wine grape	mitochondrion	30.91	33.05
VIT_06s0009g02840.t01	Wine grape	endoplasmic reticulum	32.87	32.87
VIT_07s0031g01370.t01	Wine grape	plastid	24.21	32.71
VIT_07s0031g01390.t01	Wine grape	endoplasmic reticulum, extracellular	31.5	32.13
VIT_17s0000g07200.t01	Wine grape	cytosol, mitochondrion	27.76	31.26
VIT_06s0009g03140.t01	Wine grape	endoplasmic reticulum	30.91	30.72
VIT_08s0007g05160.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	32.48	29.89
VIT_17s0000g03910.t01	Wine grape	cytosol	24.02	26.64
VIT_17s0000g03940.t01	Wine grape	plasma membrane	30.32	25.75
VIT_17s0000g03930.t01	Wine grape	endoplasmic reticulum, extracellular	25.79	13.27

Protein Annotations

Gene3D:1.10.630.10	EntrezGene:100263633	wikigene:100263633	MapMan:21.6.1.2	ProteinID:CCB57133	ProteinID:CCB57133.1
InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	UniProt:F6HQQ2	EMBL:FN596008
GO:GO:0003674	GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009809	GO:GO:0009987	GO:GO:0016020
GO:GO:0016491	GO:GO:0016705	GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0046872
GO:GO:0055114	InterPro:IPR036396	EntrezGene:LOC100263633	wikigene:LOC100263633	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF0	SUPFAM:SSF48264	UniParc:UPI00015CB18A
ArrayExpress:VIT_08s0040g00780	EnsemblPlantsGene:VIT_08s0040g00780	EnsemblPlants:VIT_08s0040g00780.t01	unigene:Vvi.7890	RefSeq:XP_002283338	RefSeq:XP_002283338.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:-:11733507..11736448

Molecular Weight (calculated)

57403.7 Da

IEP (calculated)

8.132

GRAVY (calculated)

-0.181

Length

508 amino acids

Sequence
(BLAST)

001: MALLLVLISI TAIFLAYKLY QRLRFKLPPG PHPWPIVGNL YDIKPVRFRC FAEWSQAYGP IISVWFGSTL NVIVSNSELA KEALKEKDQQ LADRHRSRSA
101: AKFSRDGKDL IWADYGPHYV KVRKVCTLEL FSPKRLEALR PIREDEVTAM VESIFKDVTN PENLGKSILL KKYLGAVAFN NITRLAFGKR FMNSEGVIDE
201: QGLEFKAIVA NGLKLGASLA MAEHIPWLRW MFPLEEEAFA KHGARRDRLT RAIMEEHTLA REKSGGAKQH FVDALLTLQD KYDLSEDTII GLLWDMITAG
301: MDTTAISVEW AMAELIKNPR VQQKVQAELD HVIGLDRVMS ESDFSNLPYL QSVAKEALRL HPPTPLMLPH RANANVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKDPEEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MLGHLLHHFN WAPPEGVNPE DLDMSENPGL VSYMRTPLQA IPTSRLPASL
501: YKRMAVDI

Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)

001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM

Arabidopsis Description

CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.