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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G010880.1
HORVU0Hr1G031710.1 endoplasmic reticulum
HORVU1Hr1G007830.4
HORVU1Hr1G045610.5
HORVU1Hr1G045630.3
HORVU1Hr1G047990.4
HORVU1Hr1G052620.1
HORVU1Hr1G068030.1 endoplasmic reticulum
HORVU1Hr1G082010.3
HORVU2Hr1G091830.4
HORVU3Hr1G030760.2
HORVU3Hr1G033870.1
HORVU3Hr1G069970.2
HORVU3Hr1G078660.1 endoplasmic reticulum
HORVU3Hr1G080830.1 endoplasmic reticulum
HORVU4Hr1G039810.2
HORVU4Hr1G080780.1
HORVU5Hr1G042290.8
HORVU5Hr1G053320.2
HORVU5Hr1G073350.1
HORVU5Hr1G084010.1
HORVU5Hr1G084020.3
HORVU6Hr1G060500.1
HORVU6Hr1G060760.3
HORVU7Hr1G007900.1
HORVU7Hr1G019380.2
HORVU7Hr1G028290.6
HORVU7Hr1G071270.2
HORVU7Hr1G075700.2
HORVU7Hr1G081290.4
HORVU7Hr1G084230.1
HORVU7Hr1G096560.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G40890.1 HORVU1Hr1G052620.1 AT1G20330.1 23175744
AT2G40890.1 HORVU4Hr1G080780.1 AT1G20330.1 23175744
AT2G40890.1 HORVU5Hr1G053320.2 AT1G51570.1 23175744
AT2G40890.1 HORVU5Hr1G073350.1 AT1G51570.1 23175744
AT2G40890.1 HORVU1Hr1G082010.3 AT1G64090.2 23175744
AT2G40890.1 HORVU3Hr1G030760.2 AT1G64090.2 23175744
AT2G40890.1 HORVU3Hr1G069970.2 AT1G64090.2 23175744
AT2G40890.1 HORVU7Hr1G075700.2 AT1G64090.2 23175744
AT2G40890.1 HORVU7Hr1G081290.4 AT1G64090.2 23175744
AT2G40890.1 HORVU4Hr1G039810.2 AT2G03510.1 23175744
AT2G40890.1 HORVU5Hr1G084010.1 AT2G20990.3 23175744
AT2G40890.1 HORVU5Hr1G084020.3 AT2G20990.3 23175744
AT2G40890.1 HORVU3Hr1G080830.1 AT2G30490.1 23175744
AT2G40890.1 HORVU3Hr1G080830.1 AT2G30490.1 23175744
AT2G40890.1 HORVU0Hr1G031710.1 AT2G40890.1 23175744
AT2G40890.1 HORVU1Hr1G068030.1 AT2G40890.1 23175744
AT2G40890.1 HORVU3Hr1G078660.1 AT2G40890.1 23175744
AT2G40890.1 HORVU2Hr1G091830.4 AT2G45140.1 23175744
AT2G40890.1 HORVU6Hr1G060760.3 AT2G45140.1 23175744
AT2G40890.1 HORVU7Hr1G071270.2 AT2G45140.1 23175744
AT2G40890.1 HORVU1Hr1G082010.3 AT2G46170.1 23175744
AT2G40890.1 HORVU3Hr1G030760.2 AT2G46170.1 23175744
AT2G40890.1 HORVU3Hr1G069970.2 AT2G46170.1 23175744
AT2G40890.1 HORVU7Hr1G075700.2 AT2G46170.1 23175744
AT2G40890.1 HORVU7Hr1G081290.4 AT2G46170.1 23175744
AT2G40890.1 HORVU0Hr1G010880.1 AT3G26830.1 23175744
AT2G40890.1 HORVU1Hr1G007830.4 AT3G26830.1 23175744
AT2G40890.1 HORVU3Hr1G033870.1 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G007900.1 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G019380.2 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G028290.6 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G084230.1 AT3G26830.1 23175744
AT2G40890.1 HORVU7Hr1G096560.2 AT3G26830.1 23175744
AT2G40890.1 HORVU1Hr1G045610.5 AT3G48890.1 23175744
AT2G40890.1 HORVU5Hr1G042290.8 AT5G22460.1 23175744
AT2G40890.1 HORVU1Hr1G082010.3 AT5G41600.1 23175744
AT2G40890.1 HORVU3Hr1G030760.2 AT5G41600.1 23175744
AT2G40890.1 HORVU3Hr1G069970.2 AT5G41600.1 23175744
AT2G40890.1 HORVU7Hr1G075700.2 AT5G41600.1 23175744
AT2G40890.1 HORVU7Hr1G081290.4 AT5G41600.1 23175744
AT2G40890.1 HORVU1Hr1G045630.3 AT5G52240.1 23175744
AT2G40890.1 HORVU6Hr1G060500.1 AT5G52240.1 23175744
AT2G40890.1 HORVU1Hr1G047990.4 AT5G53560.1 23175744
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G361900.1 Wheat endoplasmic reticulum 94.89 94.89
TraesCS3A01G331800.1 Wheat endoplasmic reticulum 94.5 94.5
TraesCS3D01G325300.1 Wheat endoplasmic reticulum 94.11 94.11
Zm00001d043174_P001 Maize mitochondrion 81.14 80.51
EES03767 Sorghum endoplasmic reticulum, extracellular 80.35 79.73
Os10t0196100-00 Rice mitochondrion 36.74 77.92
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 78.39 77.63
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 78.19 77.43
PGSC0003DMT400008504 Potato cytosol 29.08 71.15
GSMUA_Achr8P24010_001 Banana endoplasmic reticulum, extracellular 65.42 69.38
CDY06955 Canola endoplasmic reticulum 67.58 67.72
CDY14751 Canola endoplasmic reticulum 67.39 67.52
AT2G40890.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 67.19 67.32
CDY35432 Canola endoplasmic reticulum, extracellular, vacuole 66.99 67.13
KRH66683 Soybean extracellular, golgi 66.99 66.99
CDY22488 Canola cytosol, mitochondrion 46.56 66.95
PGSC0003DMT400018493 Potato endoplasmic reticulum, extracellular 66.8 66.93
Solyc10g078240.1.1 Tomato endoplasmic reticulum, extracellular 66.8 66.8
Bra000211.1-P Field mustard endoplasmic reticulum, extracellular 66.6 66.73
Bra016964.1-P Field mustard endoplasmic reticulum 64.44 66.53
Solyc01g096670.2.1 Tomato endoplasmic reticulum, extracellular 66.99 66.34
VIT_08s0040g00780.t01 Wine grape extracellular, golgi 66.01 66.14
KRG95042 Soybean mitochondrion 66.01 66.01
CDX79965 Canola endoplasmic reticulum, extracellular, vacuole 65.23 65.48
Bra004591.1-P Field mustard endoplasmic reticulum, extracellular 64.83 65.09
CDY23876 Canola endoplasmic reticulum, extracellular 64.24 64.5
PGSC0003DMT400075164 Potato cytosol 53.44 60.31
Solyc10g078220.1.1 Tomato endoplasmic reticulum 59.53 59.88
PGSC0003DMT400018494 Potato endoplasmic reticulum, extracellular 59.73 59.73
Solyc10g078230.1.1 Tomato endoplasmic reticulum, extracellular 59.53 59.53
PGSC0003DMT400038205 Potato extracellular, golgi 59.14 59.37
PGSC0003DMT400038202 Potato extracellular, golgi 58.94 59.17
Solyc01g009370.1.1 Tomato extracellular, golgi 58.74 58.97
PGSC0003DMT400018497 Potato endoplasmic reticulum, golgi 51.28 58.65
GSMUA_Achr4P10110_001 Banana endoplasmic reticulum, golgi 40.08 53.26
PGSC0003DMT400018498 Potato endoplasmic reticulum, golgi 31.43 51.61
HORVU5Hr1G061340.1 Barley endoplasmic reticulum 38.51 36.98
HORVU1Hr1G094880.5 Barley endoplasmic reticulum, plasma membrane 37.72 35.69
HORVU5Hr1G061930.2 Barley endoplasmic reticulum 36.94 35.47
HORVU6Hr1G002400.2 Barley golgi, peroxisome 36.35 34.64
HORVU7Hr1G042260.3 Barley endoplasmic reticulum 38.51 34.39
HORVU7Hr1G007580.1 Barley endoplasmic reticulum, plasma membrane 34.77 34.17
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 35.76 34.15
HORVU4Hr1G063780.1 Barley endoplasmic reticulum 33.6 33.73
HORVU2Hr1G100050.1 Barley mitochondrion 31.04 33.47
HORVU6Hr1G087250.1 Barley endoplasmic reticulum 34.38 32.96
HORVU5Hr1G061950.2 Barley plastid 32.81 28.31
HORVU2Hr1G125520.1 Barley extracellular, golgi 16.5 26.42
HORVU2Hr1G119210.4 Barley endoplasmic reticulum, golgi 18.07 25.63
Protein Annotations
Gene3D:1.10.630.10MapMan:21.6.1.2InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:HORVU3Hr1G078660EnsemblPlants:HORVU3Hr1G078660.1InterPro:IPR036396UniProt:M0UZP5PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF0SUPFAM:SSF48264TMHMM:TMhelix
UniParc:UPI000294DDF5SEG:seg::::
Description
No Description!
Coordinates
chrchr3H:-:579747332..579753561
Molecular Weight (calculated)
57404.7 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.168
Length
509 amino acids
Sequence
(BLAST)
001: MDTAALLPVA LAFLAIPVTA LLLNRLRFGK LPPGPRPWPV LGNLFQIQPV RCRCFADWAG RYGPIMTVWF GSSPTVVVST PELAQEVLKT HDQHLADRSR
101: NRSSERFSRG GMDLIWADYG PHYIKVRKLC NLELFTPRRL EALRPVREDE VTAMVESVHR AGKGGKPLAV REFLAMVGFN NITRLAFGKR FLTAQGELDE
201: QGREFKEIVN NGIKIGASLS IAEHIRWLRW LTPVDEVAYQ AHGDRRDRLT VKIMEEHARA FERSGTSKQH FVDALFTLRD KYDLSDDTVI GLLWDMITAG
301: TDTTVITVEW AVAELVRNPR VQHKVQEELD RVVGRDRVLS ETDFPSLPYL QAVVKESLRL HPPTPLMLPH KASAAVKVAG YDIPKGASVT VNVWAIARDP
401: KAWDAPLEFR PERFLHDNID IKGCDYRVLP FGAGRRVCPG AQLGINLVAS MIGHLLHHFT WALPDGARTE DLDMMESPGL ITFMRTPLQV VATPRLEKEE
501: LYKRVPVDM
Best Arabidopsis Sequence Match ( AT1G74540.1 )
(BLAST)
001: MIIYLISLLP IIVATLMLYQ RWWRSNIPPG PKPKFLLGNL HQMKPLWTHS FSEWSETYGP IISVWIGSQL TVVVSSSDLA RQVLRDKDHQ LSNRHRIARM
101: TQTGTDLVWS DYSPHYVKLR KLCTLELFSL KSIENFRSLR EMEARSMVVS ILKDLMSNSG DDQERKPVIV RKYLAAVVLN TISRLMIGKE FGSEEGKEFK
201: AIVEKEHLLS GSGTILDHVW WLKWVSSWFF SDKEFLAHKD RRTKWFRGAI MVEEDIEIED HRGFVRKLLV LKEQKELSEE TVGGLVWNML TAGADTTAVV
301: IEWAMAEMIK CPTVQEKAQQ ELDSVVGSER LMTESDIPIL PYLQCVVKEA LRLHPSTPLM LPHKASETVW VGGYKVPKGA TVYVNVQAIG RDPANWINPY
401: EFRPERFLQE ETDVKGRDFR VLPFGSGRRM CPAAQLSMNL MTLVMGNLLH CFSWSSPVPG ERIDMSENPG LLCNMRTPLQ ALALPRAAAR AIPLPLD
Arabidopsis Description
CYP98A8Cytochrome P450 98A8 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA61]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.