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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 1
  • endoplasmic reticulum 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G591400.1 Wheat endoplasmic reticulum 81.34 56.37
TraesCS2B01G592400.1 Wheat endoplasmic reticulum 81.06 56.07
HORVU2Hr1G125520.1 Barley extracellular, golgi 46.24 52.2
Zm00001d024574_P001 Maize plastid 67.97 44.61
OQU79915 Sorghum endoplasmic reticulum, plastid 64.62 44.44
HORVU5Hr1G061340.1 Barley endoplasmic reticulum 51.81 35.09
HORVU5Hr1G061930.2 Barley endoplasmic reticulum 50.7 34.34
HORVU5Hr1G061950.2 Barley plastid 51.81 31.53
HORVU7Hr1G042260.3 Barley endoplasmic reticulum 48.47 30.53
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 36.49 24.58
HORVU2Hr1G100050.1 Barley mitochondrion 30.36 23.09
Os02t0503100-00 Rice plasma membrane 32.31 20.07
HORVU6Hr1G002400.2 Barley golgi, peroxisome 28.13 18.91
HORVU1Hr1G094880.5 Barley endoplasmic reticulum, plasma membrane 28.13 18.77
HORVU7Hr1G007580.1 Barley endoplasmic reticulum, plasma membrane 26.18 18.15
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 25.91 18.09
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 25.91 18.09
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 25.63 18.07
HORVU4Hr1G063780.1 Barley endoplasmic reticulum 25.07 17.75
HORVU6Hr1G087250.1 Barley endoplasmic reticulum 25.63 17.33
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287JN25InterPro:Cyt_P450InterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005506GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016705GO:GO:0020037GO:GO:0055114
EnsemblPlantsGene:HORVU2Hr1G119210EnsemblPlants:HORVU2Hr1G119210.4InterPro:IPR036396PFAM:PF00067PRINTS:PR00463PANTHER:PTHR24298
PANTHER:PTHR24298:SF211SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B4783EASEG:seg:
Description
No Description!
Coordinates
chrchr2H:-:744611775..744620818
Molecular Weight (calculated)
40612.9 Da
IEP (calculated)
10.280
GRAVY (calculated)
-0.036
Length
359 amino acids
Sequence
(BLAST)
001: IALPKDRTLI IPSKLPPLSS AVLAQPPAEA PLMEVPWAPS LVVLLATAVF LVAILRRHRQ QSRKYNIPPG PRPWPVIGNL NLIGPLPHRS IHVLSSRYGP
101: LMSLRFGSFP IVVGSSLEAA EFFLRTHDLA FLDRPRMACG KYTVYNYSGM LWSHYGPYWR QLRKLWLTEL LSTRQLRLTE HIRGEEVRAM LRDLHPSTST
201: AASTSTGRAV VLKDHLLMVT LNVISRMVLG KKYVGEGAGS ASAVKPEQFR WMIEEIFFLN GAPHIGDMIP WLSWLDPQGY VGRMKRLGKM FDRFIEHVLR
301: EHNERRLQEG KAFVPKDMVD LLLQLADDPI LEVPISGDGV KASVLVSTSY RQGLWQYDL
Best Arabidopsis Sequence Match ( AT5G07990.1 )
(BLAST)
001: MATLFLTILL ATVLFLILRI FSHRRNRSHN NRLPPGPNPW PIIGNLPHMG TKPHRTLSAM VTTYGPILHL RLGFVDVVVA ASKSVAEQFL KIHDANFASR
101: PPNSGAKHMA YNYQDLVFAP YGHRWRLLRK ISSVHLFSAK ALEDFKHVRQ EEVGTLTREL VRVGTKPVNL GQLVNMCVVN ALGREMIGRR LFGADADHKA
201: DEFRSMVTEM MALAGVFNIG DFVPSLDWLD LQGVAGKMKR LHKRFDAFLS SILKEHEMNG QDQKHTDMLS TLISLKGTDL DGDGGSLTDT EIKALLLNMF
301: TAGTDTSAST VDWAIAELIR HPDIMVKAQE ELDIVVGRDR PVNESDIAQL PYLQAVIKEN FRLHPPTPLS LPHIASESCE INGYHIPKGS TLLTNIWAIA
401: RDPDQWSDPL AFKPERFLPG GEKSGVDVKG SDFELIPFGA GRRICAGLSL GLRTIQFLTA TLVQGFDWEL AGGVTPEKLN MEESYGLTLQ RAVPLVVHPK
501: PRLAPNVYGL GSG
Arabidopsis Description
CYP75B1TT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ9]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.