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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion
MultiLoc:mitochondrion
TargetP:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G428200.1 Wheat endoplasmic reticulum, golgi 75.21 68.8
TraesCS2D01G426300.1 Wheat endoplasmic reticulum, golgi 74.79 68.41
Os09t0441625-00 Rice cytosol 36.44 67.45
TraesCS2B01G448700.1 Wheat mitochondrion 74.79 64.3
HORVU5Hr1G061340.1 Barley endoplasmic reticulum 63.56 56.6
PGSC0003DMT400058927 Potato cytosol, endoplasmic reticulum, plastid 46.61 54.59
GSMUA_Achr5P24000_001 Banana endoplasmic reticulum 47.88 54.46
HORVU5Hr1G061930.2 Barley endoplasmic reticulum 60.59 53.96
VIT_09s0002g01090.t01 Wine grape endoplasmic reticulum 56.78 52.45
Solyc03g122360.2.1 Tomato endoplasmic reticulum, golgi 55.51 51.78
Solyc03g122350.2.1 Tomato endoplasmic reticulum 55.72 51.77
PGSC0003DMT400058930 Potato endoplasmic reticulum, golgi 55.72 51.67
KRH47614 Soybean endoplasmic reticulum 54.66 50.0
KRH06196 Soybean endoplasmic reticulum 54.24 49.71
GSMUA_Achr8P20220_001 Banana endoplasmic reticulum 49.79 48.96
VIT_11s0016g01020.t01 Wine grape endoplasmic reticulum 50.42 46.76
VIT_11s0016g01050.t01 Wine grape endoplasmic reticulum 50.0 46.37
PGSC0003DMT400016302 Potato cytosol, extracellular 40.68 45.28
VIT_11s0016g00980.t01 Wine grape plastid 50.64 44.18
HORVU5Hr1G061950.2 Barley plastid 54.87 43.9
HORVU7Hr1G042260.3 Barley endoplasmic reticulum 51.48 42.63
GSMUA_Achr8P20230_001 Banana endoplasmic reticulum, golgi 34.11 42.26
Solyc11g030730.1.1 Tomato endoplasmic reticulum, golgi 43.86 41.32
GSMUA_AchrUn_... Banana endoplasmic reticulum 29.45 41.25
PGSC0003DMT400016296 Potato golgi 43.43 40.51
Solyc04g071790.1.1 Tomato golgi 43.01 39.8
Solyc04g071780.2.1 Tomato endoplasmic reticulum, golgi 42.58 39.72
Os09t0441600-00 Rice plasma membrane 27.75 39.1
PGSC0003DMT400014232 Potato endoplasmic reticulum, golgi 42.16 39.1
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 44.07 39.02
Solyc04g071800.2.1 Tomato endoplasmic reticulum, golgi 41.53 38.51
Solyc04g071820.2.1 Tomato endoplasmic reticulum, golgi 40.89 38.29
PGSC0003DMT400046535 Potato golgi 41.1 38.11
PGSC0003DMT400002923 Potato endoplasmic reticulum, golgi 40.68 38.1
PGSC0003DMT400036189 Potato endoplasmic reticulum 40.47 38.05
GSMUA_Achr6P31060_001 Banana endoplasmic reticulum, golgi 25.85 37.2
PGSC0003DMT400012312 Potato extracellular, golgi 24.79 33.24
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 33.47 31.04
HORVU7Hr1G007580.1 Barley endoplasmic reticulum, plasma membrane 33.9 30.89
HORVU2Hr1G125520.1 Barley extracellular, golgi 20.76 30.82
HORVU2Hr1G119210.4 Barley endoplasmic reticulum, golgi 23.09 30.36
HORVU6Hr1G002400.2 Barley golgi, peroxisome 34.32 30.34
HORVU4Hr1G063780.1 Barley endoplasmic reticulum 32.42 30.18
HORVU1Hr1G094880.5 Barley endoplasmic reticulum, plasma membrane 34.11 29.93
HORVU6Hr1G087250.1 Barley endoplasmic reticulum 33.26 29.57
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 31.36 28.79
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 31.36 28.79
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287J5J4InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114EnsemblPlantsGene:HORVU2Hr1G100050EnsemblPlants:HORVU2Hr1G100050.1InterPro:IPR036396PFAM:PF00067PRINTS:PR00385
PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF211SUPFAM:SSF48264UniParc:UPI000B47039D
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:-:688960336..688962000
Molecular Weight (calculated)
52852.2 Da
IEP (calculated)
9.711
GRAVY (calculated)
-0.337
Length
472 amino acids
Sequence
(BLAST)
001: ELHGRHPLAN LDGAATMGAL PRRRARHHSL LQGRLPPQRH VQPPAGPQAM ADHRQPQPHR RAPSPLHPRA LQAVRPAHAA PFRVLPRRRR QLGRDGQALP
101: QDPRRGVXRA LLCGLHEASG RVVALKDHLT TLSLNVISRM VLGRKYLEKQ VAGEDGSAIM APEEFKCMID ELFFLNGVLN IGDSIPWLDW MDLQGYVKRM
201: KKLSNRFDRF LEHVLDDHND RRRLQGESFV SRDMVDVLLE IASDPNLEVK LHRNGVKAFI QDLIAGGTET TAITVEWAMS EMLKKPEAFS KATEELDRVV
301: GRERWVTEDD IPSLPYVEAI VKETMRLHPV APMLAPRLSR EDAFVGGYNI PVGTRVLVNV WSIGRDPTAW DAPEDFAPER FIGSKIDIKG HDFELLPFGS
401: GRRMCPGYSL GLKVIHVSLA NLLHGFVCKL PDGMPTDQLS MEEIFGLSTP RKFPLQVVMK PKLSGHLYAS GH
Best Arabidopsis Sequence Match ( AT2G40890.1 )
(BLAST)
001: MSWFLIAVAT IAAVVSYKLI QRLRYKFPPG PSPKPIVGNL YDIKPVRFRC YYEWAQSYGP IISVWIGSIL NVVVSSAELA KEVLKEHDQK LADRHRNRST
101: EAFSRNGQDL IWADYGPHYV KVRKVCTLEL FTPKRLESLR PIREDEVTAM VESVFRDCNL PENRAKGLQL RKYLGAVAFN NITRLAFGKR FMNAEGVVDE
201: QGLEFKAIVS NGLKLGASLS IAEHIPWLRW MFPADEKAFA EHGARRDRLT RAIMEEHTLA RQKSSGAKQH FVDALLTLKD QYDLSEDTII GLLWDMITAG
301: MDTTAITAEW AMAEMIKNPR VQQKVQEEFD RVVGLDRILT EADFSRLPYL QCVVKESFRL HPPTPLMLPH RSNADVKIGG YDIPKGSNVH VNVWAVARDP
401: AVWKNPFEFR PERFLEEDVD MKGHDFRLLP FGAGRRVCPG AQLGINLVTS MMSHLLHHFV WTPPQGTKPE EIDMSENPGL VTYMRTPVQA VATPRLPSDL
501: YKRVPYDM
Arabidopsis Description
CYP98A3Cytochrome P450 98A3 [Source:UniProtKB/Swiss-Prot;Acc:O22203]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.