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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 3
  • endoplasmic reticulum 5
  • extracellular 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G476400.1 Wheat endoplasmic reticulum 86.25 89.23
TraesCS1A01G442300.1 Wheat endoplasmic reticulum, extracellular 86.25 89.06
TraesCS1D01G450100.1 Wheat endoplasmic reticulum, golgi, mitochondrion 87.55 86.58
Zm00001d017077_P001 Maize endoplasmic reticulum 73.05 76.31
Os10t0320100-01 Rice plasma membrane 71.75 73.38
EES05361 Sorghum endoplasmic reticulum, extracellular 70.45 73.31
EES05356 Sorghum endoplasmic reticulum, golgi 69.89 72.73
OQU85240 Sorghum endoplasmic reticulum, golgi 64.5 72.44
KXG30541 Sorghum plastid 73.05 70.94
GSMUA_Achr3P30350_001 Banana endoplasmic reticulum 56.69 66.74
HORVU6Hr1G002400.2 Barley golgi, peroxisome 60.41 60.86
PGSC0003DMT400063351 Potato endoplasmic reticulum 51.3 60.66
VIT_17s0000g07210.t01 Wine grape extracellular, golgi 56.69 59.92
KRH54673 Soybean extracellular, plasma membrane 56.32 59.06
Solyc03g115220.2.1 Tomato extracellular, golgi 54.65 57.2
Bra009312.1-P Field mustard extracellular, golgi 53.53 56.36
CDX69984 Canola extracellular, golgi 53.35 56.16
AT5G07990.1 Thale cress endoplasmic reticulum, golgi 53.16 55.75
KRH03119 Soybean endoplasmic reticulum 44.05 52.43
KRH56828 Soybean endoplasmic reticulum, plasma membrane 49.63 52.15
VIT_17s0000g07200.t01 Wine grape cytosol, mitochondrion 43.31 51.66
KRH56827 Soybean endoplasmic reticulum, plasma membrane, plastid 49.07 51.46
KRH56830 Soybean endoplasmic reticulum 48.14 50.68
Zm00001d050955_P002 Maize endoplasmic reticulum, extracellular 72.12 45.38
HORVU4Hr1G063780.1 Barley endoplasmic reticulum 42.01 44.58
HORVU6Hr1G087250.1 Barley endoplasmic reticulum 43.68 44.26
HORVU7Hr1G007580.1 Barley endoplasmic reticulum, plasma membrane 39.96 41.51
CDX99037 Canola endoplasmic reticulum, extracellular 53.53 40.17
HORVU5Hr1G017360.1 Barley endoplasmic reticulum 39.22 39.59
HORVU5Hr1G061340.1 Barley endoplasmic reticulum 37.17 37.74
HORVU3Hr1G078660.1 Barley endoplasmic reticulum, extracellular 35.69 37.72
HORVU5Hr1G061930.2 Barley endoplasmic reticulum 36.43 36.98
HORVU7Hr1G042260.3 Barley endoplasmic reticulum 38.48 36.32
HORVU1Hr1G068030.1 Barley endoplasmic reticulum 34.57 36.19
HORVU0Hr1G031710.1 Barley endoplasmic reticulum 34.57 36.19
HORVU2Hr1G100050.1 Barley mitochondrion 29.93 34.11
HORVU5Hr1G061950.2 Barley plastid 33.27 30.34
HORVU2Hr1G119210.4 Barley endoplasmic reticulum, golgi 18.77 28.13
HORVU2Hr1G125520.1 Barley extracellular, golgi 16.54 27.99
Protein Annotations
Gene3D:1.10.630.10MapMan:9.2.2.4.1InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-IInterPro:Cyt_P450_sf
GO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491GO:GO:0016705
GO:GO:0020037GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:HORVU1Hr1G094880EnsemblPlants:HORVU1Hr1G094880.5InterPro:IPR036396
UniProt:M0V2A3PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF104SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI0002952DABSEG:seg:
Description
No Description!
Coordinates
chrchr1H:-:556691890..556693885
Molecular Weight (calculated)
58934.5 Da
IEP (calculated)
7.016
GRAVY (calculated)
0.040
Length
538 amino acids
Sequence
(BLAST)
001: MICICICMPA PAANQQAIMD HDLLLLLASL AAAVLAAAVW HLRGHANGPN VLPLPPGPRG WPVLGNLPQL GDKPHHTMAA LARRHGPLFR LRFGSADVVV
101: AASAKVAATF LRAHDANFTD RPPNSGAEHV AYNYQDLVFA PYGARWRALR KLCALHLFSA RALDALRYVR QEEARLMVTR LHLLSSSSGL PVAVGQEANV
201: CATNALALAA VGRRVFGHGV GEGAREFKDM VVELMQLAGV FNIGDFVPAL RWLDPQGVVG KMKRLHRRYD RMMDGFISER EHLADAQGND LLSVMLGMMR
301: HSPPDDDQGI NFNDTDIKAL LLNLFTAGTD TTSSTVEWAL AELIRHPDVL KKLQRELDDV VGNERLVTES DLPQLTFLAA VIKETFRLHP STPLSLPRVA
401: AEDCEVDGYR VPKGTTLLVN VWAIARDPDS WGPDALEFRP ARFLSGGSHE SVDVKGADYE LIPFGAGRRI CAGLSWGLRM VTLMTATLVH AFDWSLVDGM
501: TPQKLDMEEA YGLTLQRAVP LMLQPVPRLL PSAAYYTV
Best Arabidopsis Sequence Match ( AT5G07990.1 )
(BLAST)
001: MATLFLTILL ATVLFLILRI FSHRRNRSHN NRLPPGPNPW PIIGNLPHMG TKPHRTLSAM VTTYGPILHL RLGFVDVVVA ASKSVAEQFL KIHDANFASR
101: PPNSGAKHMA YNYQDLVFAP YGHRWRLLRK ISSVHLFSAK ALEDFKHVRQ EEVGTLTREL VRVGTKPVNL GQLVNMCVVN ALGREMIGRR LFGADADHKA
201: DEFRSMVTEM MALAGVFNIG DFVPSLDWLD LQGVAGKMKR LHKRFDAFLS SILKEHEMNG QDQKHTDMLS TLISLKGTDL DGDGGSLTDT EIKALLLNMF
301: TAGTDTSAST VDWAIAELIR HPDIMVKAQE ELDIVVGRDR PVNESDIAQL PYLQAVIKEN FRLHPPTPLS LPHIASESCE INGYHIPKGS TLLTNIWAIA
401: RDPDQWSDPL AFKPERFLPG GEKSGVDVKG SDFELIPFGA GRRICAGLSL GLRTIQFLTA TLVQGFDWEL AGGVTPEKLN MEESYGLTLQ RAVPLVVHPK
501: PRLAPNVYGL GSG
Arabidopsis Description
CYP75B1TT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ9]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.