Factsheet for TraesCS1D01G450100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi

Predictor Summary:

mitochondrion 3
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, mitochondrion
Any Predictor:	endoplasmic reticulum, golgi, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G442300.1	Wheat	endoplasmic reticulum, extracellular	93.01	97.12
TraesCS1B01G476400.1	Wheat	endoplasmic reticulum	90.81	95.0
HORVU1Hr1G094880.5	Barley	endoplasmic reticulum, plasma membrane	86.58	87.55
Zm00001d017077_P001	Maize	endoplasmic reticulum	72.06	76.12
Os10t0320100-01	Rice	plasma membrane	71.88	74.33
EES05361	Sorghum	endoplasmic reticulum, extracellular	70.04	73.69
EES05356	Sorghum	endoplasmic reticulum, golgi	69.67	73.31
OQU85240	Sorghum	endoplasmic reticulum, golgi	64.15	72.86
KXG30541	Sorghum	plastid	72.98	71.66
GSMUA_Achr3P30350_001	Banana	endoplasmic reticulum	56.25	66.96
TraesCS7D01G404900.1	Wheat	endoplasmic reticulum, extracellular	63.05	65.21
TraesCS6D01G015200.1	Wheat	endoplasmic reticulum	61.21	64.04
PGSC0003DMT400063351	Potato	endoplasmic reticulum	50.55	60.44
VIT_17s0000g07210.t01	Wine grape	extracellular, golgi	56.07	59.92
KRH54673	Soybean	extracellular, plasma membrane	55.88	59.26
Solyc03g115220.2.1	Tomato	extracellular, golgi	54.04	57.2
Bra009312.1-P	Field mustard	extracellular, golgi	52.57	55.97
CDX69984	Canola	extracellular, golgi	52.39	55.77
AT5G07990.1	Thale cress	endoplasmic reticulum, golgi	51.65	54.78
KRH03119	Soybean	endoplasmic reticulum	44.3	53.32
VIT_17s0000g07200.t01	Wine grape	cytosol, mitochondrion	43.57	52.55
KRH56828	Soybean	endoplasmic reticulum, plasma membrane	48.9	51.95
KRH56827	Soybean	endoplasmic reticulum, plasma membrane, plastid	48.9	51.85
KRH56830	Soybean	endoplasmic reticulum	47.61	50.68
Zm00001d050955_P002	Maize	endoplasmic reticulum, extracellular	72.24	45.96
TraesCS6D01G353200.1	Wheat	endoplasmic reticulum	43.01	44.57
TraesCS7D01G027800.1	Wheat	cytosol	18.01	43.36
TraesCS4D01G224700.2	Wheat	endoplasmic reticulum	36.58	42.7
TraesCS6D01G008100.1	Wheat	endoplasmic reticulum	39.52	41.91
TraesCS7D01G036900.1	Wheat	endoplasmic reticulum	38.97	41.65
TraesCS2D01G504100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.97	41.49
CDX99037	Canola	endoplasmic reticulum, extracellular	52.57	39.89
TraesCS5D01G217200.1	Wheat	endoplasmic reticulum, golgi	36.4	38.45
TraesCS5D01G217400.1	Wheat	endoplasmic reticulum, golgi	36.21	38.25
TraesCS7D01G028300.1	Wheat	endoplasmic reticulum, extracellular	35.85	38.01
TraesCS5D01G075000.1	Wheat	endoplasmic reticulum, peroxisome, plastid	39.15	37.37
TraesCS6D01G063100.2	Wheat	endoplasmic reticulum	35.48	37.26
TraesCS2D01G581700.1	Wheat	endoplasmic reticulum	33.46	37.14
TraesCS3D01G325300.1	Wheat	endoplasmic reticulum	34.74	37.13
TraesCS2D01G426300.1	Wheat	endoplasmic reticulum, golgi	35.11	37.02
TraesCS7D01G028200.1	Wheat	endoplasmic reticulum, extracellular	34.19	36.47
TraesCS1D01G310000.1	Wheat	endoplasmic reticulum	33.46	35.55
TraesCS7D01G306000.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	32.17	32.89

Protein Annotations

Gene3D:1.10.630.10	MapMan:9.2.2.4.1	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152
GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385
PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF104	SUPFAM:SSF48264	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1D01G450100	EnsemblPlants:TraesCS1D01G450100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:492534242..492538011

Molecular Weight (calculated)

59276.7 Da

IEP (calculated)

7.104

GRAVY (calculated)

-0.065

Length

544 amino acids

Sequence
(BLAST)

001: MPCARPTNKQ TSPHPLPPSM TPAAMDHDLL LLLASLAAVI VAAVWHLRGH GSGARKPKLP LPPGPRGWPV LGNLPQLGDK PHHTMAALAR LHGLLFRLRF
101: GSAEVVVAAS AKVAGSFLRA HDANFSDRPP NSGAEHVAYN YQDLVFAPYG ARWRALRKLC AQHLFSARAL DALRTVRQDE ARLMVTRLLS SSDSPAGLAV
201: GQEANVCATN ALALAAVGRR VFGDGVGEGA REFKDMVVEL MQLAGVFNIG DFVPALRWLD PQGVVAKMKR LHRRYDRMMD GFISERGDRA DGDGNDLLSV
301: MLGMMRQSPP AGGEEDGIKF NETDIKALLL NLFTAGTDTT SSTVEWALAE LIRHPDVLKK LQHELDDVVG NGRLVTESDL PQLTFLAAVI KETFRLHPST
401: PLSLPRVAAE DCEVDGYRIP KDTTLLVNVW AIARDPASWG DDVLEFRPTR FLPGGSHESV DVKGGDYELI PFGAGRRICA GLSWGLRMVT LTTATLVHAF
501: DWTLVDGMTP EKLDMEEAYG LTLQRAVPLM VQPVPRLLPS AYTM

Best Arabidopsis Sequence Match ( AT2G45550.1 )
(BLAST)

001: MDIISGQALF LLFCFISSCF LISTTARSRR SSGRAATLPP GPPRLPIIGN IHQVGKNPHS SFADLAKIYG PIMSLKFGCL NSVVITSPEA AREVLRTHDQ
101: ILSGRKSNDS IRCFGHEEVS VIWLPPSSAR WRMLRKLSVT LMFSPQRTEA TKALRMKKVQ ELVSFMNESS ERKEAVDISR ASYTTVLNII SNILFSVDLG
201: SYDSKKSNEF QDTVIGAMEA AGKPDAANYF PFMGFLDLQG NRKAMRGLTE RLFRVFRGFM DAKIAEKSLG NYSKDVSNRD FLDSLLILNE GDEAELDNND
301: IEHLLLDMFT AGTDTSSSTL EWAMAELLRN PKTMVKAQAE MDRVLGQNSV VQESDISGLP YLQAVVKETF RLHPAAPLLV PRKAESDVEV LGFMVPKDTQ
401: VLVNVWAIGR DPSVWENPSQ FEPERFMGKD IDVKGRDYEL TPFGGGRRIC PGLPLAVKTV SLMLASLLYS FDWKLPNGVV SEDLDMDETF GITLHRTNTL
501: YAIPVKKQTI N

Arabidopsis Description

CYP76C4Cytochrome P450 76C4 [Source:UniProtKB/Swiss-Prot;Acc:O64635]
SUBAcon: [endoplasmic reticulum,golgi,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.