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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES05356 Sorghum endoplasmic reticulum, golgi 99.58 92.26
EES05361 Sorghum endoplasmic reticulum, extracellular 92.9 86.07
Zm00001d017077_P001 Maize endoplasmic reticulum 89.56 83.3
KXG30541 Sorghum plastid 94.99 82.13
Os10t0320100-01 Rice plasma membrane 81.63 74.33
TraesCS1A01G442300.1 Wheat endoplasmic reticulum, extracellular 73.49 67.56
TraesCS1B01G476400.1 Wheat endoplasmic reticulum 73.07 67.31
TraesCS2B01G613200.1 Wheat endoplasmic reticulum 71.82 66.28
HORVU1Hr1G094880.5 Barley endoplasmic reticulum, plasma membrane 72.44 64.5
TraesCS1D01G450100.1 Wheat endoplasmic reticulum, golgi, mitochondrion 72.86 64.15
TraesCS1A01G442200.1 Wheat endoplasmic reticulum, plasma membrane 65.76 63.51
GSMUA_Achr3P30350_001 Banana endoplasmic reticulum 57.2 59.96
EES18344 Sorghum endoplasmic reticulum, plasma membrane 66.18 59.25
VIT_17s0000g07210.t01 Wine grape extracellular, golgi 62.63 58.94
PGSC0003DMT400063351 Potato endoplasmic reticulum 53.86 56.7
Solyc03g115220.2.1 Tomato extracellular, golgi 57.41 53.5
CDX69984 Canola extracellular, golgi 56.99 53.42
Bra009312.1-P Field mustard extracellular, golgi 56.99 53.42
KRH54673 Soybean extracellular, plasma membrane 56.99 53.22
AT5G07990.1 Thale cress endoplasmic reticulum, golgi 56.16 52.44
KRH03119 Soybean endoplasmic reticulum 48.64 51.55
VIT_17s0000g07200.t01 Wine grape cytosol, mitochondrion 47.6 50.55
Zm00001d050955_P002 Maize endoplasmic reticulum, extracellular 89.56 50.18
KRH56828 Soybean endoplasmic reticulum, plasma membrane 51.98 48.63
KRH56827 Soybean endoplasmic reticulum, plasma membrane, plastid 51.57 48.15
KRH56830 Soybean endoplasmic reticulum 50.94 47.75
OQU92546 Sorghum endoplasmic reticulum, plasma membrane 44.26 40.23
EER94806 Sorghum endoplasmic reticulum, plasma membrane 44.26 39.85
CDX99037 Canola endoplasmic reticulum, extracellular 56.99 38.08
OQU92580 Sorghum endoplasmic reticulum 38.2 37.65
EER98974 Sorghum endoplasmic reticulum 40.92 37.55
EER95901 Sorghum endoplasmic reticulum 42.38 37.52
EER98975 Sorghum plastid 40.08 36.85
EER94825 Sorghum endoplasmic reticulum, plastid 40.71 36.72
EER96795 Sorghum endoplasmic reticulum 39.67 36.68
OQU79915 Sorghum endoplasmic reticulum, plastid 39.87 36.59
EER98976 Sorghum endoplasmic reticulum 39.46 36.56
KXG25275 Sorghum endoplasmic reticulum, plastid 41.13 36.48
EER94824 Sorghum endoplasmic reticulum, plastid 40.08 36.29
EER95892 Sorghum plastid 39.67 35.85
EER94822 Sorghum endoplasmic reticulum 40.08 35.75
OQU79385 Sorghum endoplasmic reticulum 40.08 35.62
EER98011 Sorghum endoplasmic reticulum, plastid 39.25 34.88
OQU80592 Sorghum endoplasmic reticulum, golgi 37.58 34.48
EES18431 Sorghum endoplasmic reticulum 36.33 33.98
EES03767 Sorghum endoplasmic reticulum, extracellular 34.03 31.77
EES14499 Sorghum endoplasmic reticulum, golgi 34.03 30.99
Protein Annotations
Gene3D:1.10.630.10MapMan:9.2.2.4.1UniProt:A0A1Z5RNB5InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0016705GO:GO:0020037GO:GO:0046872
GO:GO:0055114InterPro:IPR036396EnsemblPlants:OQU85240ProteinID:OQU85240ProteinID:OQU85240.1PFAM:PF00067
PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298PANTHER:PTHR24298:SF104EnsemblPlantsGene:SORBI_3004G200833
SUPFAM:SSF48264UniParc:UPI000B8B9D9ESEG:seg:::
Description
hypothetical protein
Coordinates
chr4:+:55225514..55227179
Molecular Weight (calculated)
52651.9 Da
IEP (calculated)
9.011
GRAVY (calculated)
-0.090
Length
479 amino acids
Sequence
(BLAST)
001: MDVPLPLLLG SLAVSVVVWC LLLRRGGDGK GKGKRPMPPG PRGWPVLGNL PQLGSHPHHT MCALAKKYGP LFRLRFGSAE VVVAASARVA AQFLRTHDAN
101: FSNRPPNSGA EHVAYNYQDM AFAPYGSRWR ALRKLCALHL FSAKALDDLR SIREGEVALL VRELSRHQHQ HAGVPLGQVA NVCATNTLAR ATVGRRVFAV
201: DGGEEAREFK DMVVELMQLA GVFNVGDFVP ALARLDLQGV VGKMKRLHRR YDDMMNGIIR ERKAAEEGKD LLSVLLARTR EQQSIADGED SRITETEIKA
301: LLLNLFTAGT DTTSSTVEWA LAELIRHPDV LKKAQEELDA VVGRNRLVSE LDLPRLTYLT AVIKETFRMH PSTPLSLPRI AAEECEVDGF RIPAGTTLLV
401: NVWAIARDPE AWPEPLQFRP DRFLPGGSHA GVDVKGSDFE LIPFGAGRRI CAGLSWGLRM VTLMTATLVH ALDWTSPTA
Best Arabidopsis Sequence Match ( AT5G07990.1 )
(BLAST)
001: MATLFLTILL ATVLFLILRI FSHRRNRSHN NRLPPGPNPW PIIGNLPHMG TKPHRTLSAM VTTYGPILHL RLGFVDVVVA ASKSVAEQFL KIHDANFASR
101: PPNSGAKHMA YNYQDLVFAP YGHRWRLLRK ISSVHLFSAK ALEDFKHVRQ EEVGTLTREL VRVGTKPVNL GQLVNMCVVN ALGREMIGRR LFGADADHKA
201: DEFRSMVTEM MALAGVFNIG DFVPSLDWLD LQGVAGKMKR LHKRFDAFLS SILKEHEMNG QDQKHTDMLS TLISLKGTDL DGDGGSLTDT EIKALLLNMF
301: TAGTDTSAST VDWAIAELIR HPDIMVKAQE ELDIVVGRDR PVNESDIAQL PYLQAVIKEN FRLHPPTPLS LPHIASESCE INGYHIPKGS TLLTNIWAIA
401: RDPDQWSDPL AFKPERFLPG GEKSGVDVKG SDFELIPFGA GRRICAGLSL GLRTIQFLTA TLVQGFDWEL AGGVTPEKLN MEESYGLTLQ RAVPLVVHPK
501: PRLAPNVYGL GSG
Arabidopsis Description
CYP75B1TT7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNZ9]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.