CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
golgi 5
plasma membrane 5
endoplasmic reticulum 7
vacuole 5
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029243_P001	Maize	endoplasmic reticulum	83.24	85.14
EER94825	Sorghum	endoplasmic reticulum, plastid	66.67	67.42
EER94824	Sorghum	endoplasmic reticulum, plastid	65.36	66.35
OQU92580	Sorghum	endoplasmic reticulum	59.22	65.43
EER95901	Sorghum	endoplasmic reticulum	65.36	64.88
EER98976	Sorghum	endoplasmic reticulum	62.01	64.41
EER96795	Sorghum	endoplasmic reticulum	61.83	64.09
EER98975	Sorghum	plastid	59.96	61.8
OQU79915	Sorghum	endoplasmic reticulum, plastid	59.4	61.11
EER98974	Sorghum	endoplasmic reticulum	57.17	58.81
KXG25275	Sorghum	endoplasmic reticulum, plastid	56.98	56.67
OQU80592	Sorghum	endoplasmic reticulum, golgi	54.56	56.13
EER95892	Sorghum	plastid	51.21	51.89
OQU79385	Sorghum	endoplasmic reticulum	51.02	50.83
EER98011	Sorghum	endoplasmic reticulum, plastid	49.91	49.72
EES05361	Sorghum	endoplasmic reticulum, extracellular	39.66	41.2
EES05356	Sorghum	endoplasmic reticulum, golgi	39.11	40.62
OQU85240	Sorghum	endoplasmic reticulum, golgi	35.75	40.08
KXG30541	Sorghum	plastid	40.04	38.81
EES18344	Sorghum	endoplasmic reticulum, plasma membrane	38.36	38.5
EES03767	Sorghum	endoplasmic reticulum, extracellular	36.5	38.21
EES18431	Sorghum	endoplasmic reticulum	36.31	38.09
OQU92546	Sorghum	endoplasmic reticulum, plasma membrane	36.69	37.38
EER94806	Sorghum	endoplasmic reticulum, plasma membrane	36.5	36.84
EES14499	Sorghum	endoplasmic reticulum, golgi	35.75	36.5

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	EntrezGene:8080795	UniProt:C5WZK7	InterPro:Cyt_P450	InterPro:Cyt_P450_CS
InterPro:Cyt_P450_E_grp-I	InterPro:Cyt_P450_sf	EnsemblPlants:EER94822	ProteinID:EER94822	ProteinID:EER94822.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004497	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0016705
GO:GO:0016709	GO:GO:0019748	GO:GO:0020037	GO:GO:0044550	GO:GO:0046872	GO:GO:0055114
InterPro:IPR036396	PFAM:PF00067	PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298
PANTHER:PTHR24298:SF211	EnsemblPlantsGene:SORBI_3001G363700	SUPFAM:SSF48264	unigene:Sbi.4195	TMHMM:TMhelix	UniParc:UPI0001A833D8
RefSeq:XP_002467824.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:65296362..65298761

Molecular Weight (calculated)

59716.8 Da

IEP (calculated)

9.054

GRAVY (calculated)

-0.089

Length

537 amino acids

Sequence
(BLAST)

001: MELAPSSASF LAVVVAAAAA LFLATILRLR PRSTRNKYRL PPGPRPWPVI GNLNLIGRLP HRSIHELSKR YGPLMSLRFG SFPVVVGSSV DTARLFLRTH
101: DLAFIDRPQT AAGKYTTYNC GGLFYQPYGA YWRQGRKLCQ AELFNERRLT SLEHVRGEEV RAMVRDLHAA ASAAAAGCSG GGGGGGRAVV ALKEHLYMVN
201: LHVISRMLLG KKYIVDGSGS PATPEEFRWL IDEHFFLNGV LNVADMIPWL SCLDPHGYIK RMKRSAKMWD RFLEHVLDEH NRRRRREGKD FVAMDMMDVL
301: LELADDPNLE VPIKRDNVKA FILDLMGGGT DTSAVTVEWA MSELLRNPDV LAKATEELDR VIGQDRLVAE RDIPNLPYME AIVKETLRLH PVAPLLTPRL
401: SREDVSAGGY DIPAGTRVFV NTWSIGRDPA VWEAPMEFRP ERFVVGSRGG GVDLKGQHFE LLPFGSGRRM CPGMGLALRM VPMILANLLH AFAWRLPDGV
501: AAEELSMEET FGITVPRLVP LEAIAEPKLP ARLYAGP

Best Arabidopsis Sequence Match ( AT4G31940.1 )
(BLAST)

001: MDTSLFSLFV PILVFVFIAL FKKSKKPKYV KAPAPSGAWP IIGHLHLLGG KEQLLYRTLG KMADHYGPAM SLQLGSNEAF VVSSFEVAKD CFTVNDKALA
101: SRPMTAAAKH MGYNFAVFGF APYSAFWREM RKIATIELLS NRRLQMLKHV RVSEITMGVK DLYSLWFKNG GTKPVMVDLK SWLEDMTLNM IVRMVAGKRY
201: FGGGGSVSSE DTEEAMQCKK AIAKFFHLIG IFTVSDAFPT LSFFDLQGHE KEMKQTGSEL DVILERWIEN HRQQRKFSGT KENDSDFIDV MMSLAEQGKL
301: SHLQYDANTS IKSTCLALIL GGSDTSASTL TWAISLLLNN KEMLKKAQDE IDIHVGRDRN VEDSDIENLV YLQAIIKETL RLYPAGPLLG PREAMEDCTV
401: AGYYVPCGTR LIVNVWKIQR DPKVYMEPNE FRPERFITGE AKEFDVRGQN FELMPFGSGR RSCPGSSLAM QVLHLGLARF LHSFDVKTVM DMPVDMSENP
501: GLTIPKATPL EVLISPRIKE ELFV

Arabidopsis Description

CYP82C4Cytochrome P450 82C4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZ46]
SUBAcon: [extracellular,golgi,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.